RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 DIS3Q9Y2L1 958 aaKnown RBP4.93□□□□□ -1.62
UBR3-206ENST00000444475 KLRG2A4D1S0 409 aaPredicted RBP4.92□□□□□ -1.62
UBR3-206ENST00000444475 TRAPPC10P48553 1259 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 EPHB1P54762 984 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 PDE3BQ13370 1112 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 ATXN2LQ8WWM7 1075 aaKnown RBP4.92□□□□□ -1.62
UBR3-206ENST00000444475 TAGLN3Q9UI15 199 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 INTUQ9ULD6 942 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 PRRT4C9JH25 899 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 CDC45O75419 566 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 NPR3P17342 541 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 RRM1P23921 792 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 FOXK1P85037 733 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 MCL1Q07820 350 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 SPICE1Q8N0Z3 855 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 TEX19Q8NA77 164 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 EPS8L1Q8TE68 723 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 CDHR5Q9HBB8 845 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 SNTG2Q9NY99 539 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 CTSHP09668 335 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 FAM83BQ5T0W9 1011 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 PRPF38BQ5VTL8 546 aaKnown RBP4.92□□□□□ -1.62
UBR3-206ENST00000444475 FAM200AQ8TCP9 573 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 FANCLQ9NW38 375 aa4.92□□□□□ -1.62
UBR3-206ENST00000444475 SORBS3O60504 671 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 ALDH1L1O75891 902 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 KRT18P05783 430 aaKnown RBP4.91□□□□□ -1.62
UBR3-206ENST00000444475 CC2D1AQ6P1N0 951 aaPredicted RBP4.91□□□□□ -1.62
UBR3-206ENST00000444475 ANKRD13DQ6ZTN6 518 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 GLYCTKQ8IVS8 523 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 SH3TC2Q8TF17 1288 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 E2F7Q96AV8 911 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 TRIM44Q96DX7 344 aaPredicted RBP4.91□□□□□ -1.62
UBR3-206ENST00000444475 ANO2Q9NQ90 1003 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 TMEM260Q9NX78 707 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 CXXC1Q9P0U4 656 aaPredicted RBP4.91□□□□□ -1.62
UBR3-206ENST00000444475 DNMT3AQ9Y6K1 912 aaPredicted RBP4.91□□□□□ -1.62
UBR3-206ENST00000444475 CASP2P42575 452 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 ZC3H12AQ5D1E8 599 aaKnown RBP4.91□□□□□ -1.62
UBR3-206ENST00000444475 GJC2Q5T442 439 aaPredicted RBP4.91□□□□□ -1.62
UBR3-206ENST00000444475 ZNF654Q8IZM8 581 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 PXYLP1Q8TE99 480 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 GOLGA1Q92805 767 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 KLF4O43474 513 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 VAMP4O75379 141 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 HCLS1P14317 486 aaPredicted RBP4.91□□□□□ -1.62
UBR3-206ENST00000444475 MYRIPQ8NFW9 859 aa4.91□□□□□ -1.62
UBR3-206ENST00000444475 DUSP9Q99956 384 aaKnown RBP4.91□□□□□ -1.62
UBR3-206ENST00000444475 EIF4G1Q04637 1599 aaKnown RBP4.91□□□□□ -1.62
UBR3-206ENST00000444475 TTF1Q15361 905 aaPredicted RBP4.9□□□□□ -1.62
UBR3-206ENST00000444475 WDR75Q8IWA0 830 aaKnown RBP4.9□□□□□ -1.62
UBR3-206ENST00000444475 SUGP1Q8IWZ8 645 aaKnown RBP4.9□□□□□ -1.62
UBR3-206ENST00000444475 CCDC89Q8N998 374 aa4.9□□□□□ -1.62
UBR3-206ENST00000444475 TRMT2BQ96GJ1 504 aaKnown RBP4.9□□□□□ -1.62
UBR3-206ENST00000444475 PRKD2Q9BZL6 878 aa4.9□□□□□ -1.62
UBR3-206ENST00000444475 LUZP4Q9P127 313 aa4.9□□□□□ -1.62
UBR3-206ENST00000444475 CDV3Q9UKY7 258 aaKnown RBP4.9□□□□□ -1.62
UBR3-206ENST00000444475 PCDHGB7Q9Y5F8 929 aa4.9□□□□□ -1.62
UBR3-206ENST00000444475 FAM221BA6H8Z2 402 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 CTDSPL2Q05D32 466 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 Q3C1V9 767 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 ANKMY2Q8IV38 441 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 BORCS6Q96GS4 357 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 MYCBPQ99417 103 aaPredicted RBP4.9□□□□□ -1.63
UBR3-206ENST00000444475 MOXD2PA6NHM9 499 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 USP17L5A8MUK1 530 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 MAP3K7O43318 606 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 RPN1P04843 607 aaKnown RBP4.9□□□□□ -1.63
UBR3-206ENST00000444475 PEX19P40855 299 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 GRAMD1BQ3KR37 738 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 L1TD1Q5T7N2 865 aaKnown RBP4.9□□□□□ -1.63
UBR3-206ENST00000444475 NBPF10Q6P3W6 841 aaKnown RBP4.9□□□□□ -1.63
UBR3-206ENST00000444475 LRP10Q7Z4F1 713 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 C14orf80Q86SX3 495 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 LILRB2Q8N423 598 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 NUDT16Q96DE0 195 aaKnown RBP4.9□□□□□ -1.63
UBR3-206ENST00000444475 SIRPGQ9P1W8 387 aa4.9□□□□□ -1.63
UBR3-206ENST00000444475 SCGB1D2O95969 90 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 HTR3AP46098 478 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 HYIQ5T013 277 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 FAM174AQ8TBP5 190 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 RASGRP4Q8TDF6 673 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 ZNF594Q96JF6 807 aaPredicted RBP4.89□□□□□ -1.63
UBR3-206ENST00000444475 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.89□□□□□ -1.63
UBR3-206ENST00000444475 ODF2LQ9ULJ1 636 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 MSRB2Q9Y3D2 182 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 ABL1P00519 1130 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 MYL3P08590 195 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 PPP2R5AQ15172 486 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 PDXDC2PQ6P474 469 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.89□□□□□ -1.63
UBR3-206ENST00000444475 CABLES1Q8TDN4 633 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 NELL2Q99435 816 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 ATP8A1Q9Y2Q0 1164 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 ESYT3A0FGR9 886 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 TTC8Q8TAM2 541 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 DDX12PQ92771 950 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 NELL1Q92832 810 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 GJA3Q9Y6H8 435 aa4.89□□□□□ -1.63
UBR3-206ENST00000444475 TCEA3O75764 348 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms