RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 ADCK5Q3MIX3 580 aa19.08■□□□□ 0.64
PDZD4-202ENST00000393758 RAD50Q92878 1312 aa19.07■□□□□ 0.64
PDZD4-202ENST00000393758 BTBD11A6QL63 1104 aa19.07■□□□□ 0.64
PDZD4-202ENST00000393758 TPM3P06753 285 aa19.07■□□□□ 0.64
PDZD4-202ENST00000393758 U2AF2P26368 475 aaKnown RBP eCLIP19.07■□□□□ 0.64
PDZD4-202ENST00000393758 ZNF165P49910 485 aa19.07■□□□□ 0.64
PDZD4-202ENST00000393758 DNAJC25Q9H1X3 360 aa19.07■□□□□ 0.64
PDZD4-202ENST00000393758 ADGRB2O60241 1585 aa19.07■□□□□ 0.64
PDZD4-202ENST00000393758 TYRO3Q06418 890 aa19.06■□□□□ 0.64
PDZD4-202ENST00000393758 METP08581 1390 aa19.06■□□□□ 0.64
PDZD4-202ENST00000393758 CWF19L2Q2TBE0 894 aaKnown RBP19.06■□□□□ 0.64
PDZD4-202ENST00000393758 CCDC73Q6ZRK6 1079 aa19.06■□□□□ 0.64
PDZD4-202ENST00000393758 NEUROD6Q96NK8 337 aa19.06■□□□□ 0.64
PDZD4-202ENST00000393758 SDF4Q9BRK5 362 aa19.06■□□□□ 0.64
PDZD4-202ENST00000393758 BCL2L12Q9HB09 334 aa19.06■□□□□ 0.64
PDZD4-202ENST00000393758 KIAA0232Q92628 1395 aa19.06■□□□□ 0.64
PDZD4-202ENST00000393758 LRMPQ12912 555 aa19.06■□□□□ 0.64
PDZD4-202ENST00000393758 SH2B1Q9NRF2 756 aaPredicted RBP19.06■□□□□ 0.64
PDZD4-202ENST00000393758 CLIP2Q9UDT6 1046 aa19.06■□□□□ 0.64
PDZD4-202ENST00000393758 PPP6R1Q9UPN7 881 aa19.06■□□□□ 0.64
PDZD4-202ENST00000393758 PRR36Q9H6K5 1346 aa19.05■□□□□ 0.64
PDZD4-202ENST00000393758 INO80Q9ULG1 1556 aaPredicted RBP19.05■□□□□ 0.64
PDZD4-202ENST00000393758 CAMSAP1Q5T5Y3 1602 aa19.05■□□□□ 0.64
PDZD4-202ENST00000393758 FAM227BQ96M60 508 aa19.05■□□□□ 0.64
PDZD4-202ENST00000393758 FAM200AQ8TCP9 573 aa19.05■□□□□ 0.64
PDZD4-202ENST00000393758 MAP3K2Q9Y2U5 619 aa19.05■□□□□ 0.64
PDZD4-202ENST00000393758 CEBPAP49715 358 aaPredicted RBP19.05■□□□□ 0.64
PDZD4-202ENST00000393758 GORABQ5T7V8 394 aa19.05■□□□□ 0.64
PDZD4-202ENST00000393758 NRDCO43847 1150 aa19.04■□□□□ 0.64
PDZD4-202ENST00000393758 LIG1P18858 919 aa19.04■□□□□ 0.64
PDZD4-202ENST00000393758 HDAC5Q9UQL6 1122 aa19.04■□□□□ 0.64
PDZD4-202ENST00000393758 NEXNQ0ZGT2 675 aa19.04■□□□□ 0.64
PDZD4-202ENST00000393758 CDC37L1Q7L3B6 337 aa19.04■□□□□ 0.64
PDZD4-202ENST00000393758 RGS12O14924 1447 aa19.03■□□□□ 0.64
PDZD4-202ENST00000393758 NMIQ13287 307 aaPredicted RBP19.03■□□□□ 0.64
PDZD4-202ENST00000393758 ME3Q16798 604 aa19.03■□□□□ 0.64
PDZD4-202ENST00000393758 IL17REQ8NFR9 667 aa19.03■□□□□ 0.64
PDZD4-202ENST00000393758 ME1P48163 572 aa19.03■□□□□ 0.64
PDZD4-202ENST00000393758 KLHDC4Q8TBB5 520 aa19.03■□□□□ 0.64
PDZD4-202ENST00000393758 AMOTL2Q9Y2J4 779 aa19.03■□□□□ 0.64
PDZD4-202ENST00000393758 CHMP4AQ9BY43 222 aa19.02■□□□□ 0.64
PDZD4-202ENST00000393758 MTMR6Q9Y217 621 aa19.02■□□□□ 0.64
PDZD4-202ENST00000393758 NDUFB9Q9Y6M9 179 aa19.02■□□□□ 0.64
PDZD4-202ENST00000393758 VWDEQ8N2E2 1590 aa19.02■□□□□ 0.64
PDZD4-202ENST00000393758 KINO60870 393 aaKnown RBP19.02■□□□□ 0.64
PDZD4-202ENST00000393758 HOMER1Q86YM7 354 aa19.02■□□□□ 0.64
PDZD4-202ENST00000393758 PTPRMP28827 1452 aa19.02■□□□□ 0.63
PDZD4-202ENST00000393758 GNL2Q13823 731 aaKnown RBP19.02■□□□□ 0.63
PDZD4-202ENST00000393758 CREB3L3Q68CJ9 461 aa19.02■□□□□ 0.63
PDZD4-202ENST00000393758 CD163L1Q9NR16 1453 aa19.01■□□□□ 0.63
PDZD4-202ENST00000393758 KCNQ3O43525 872 aa19.01■□□□□ 0.63
PDZD4-202ENST00000393758 PSME1Q06323 249 aa19.01■□□□□ 0.63
PDZD4-202ENST00000393758 SCAND2PQ9GZW5 306 aaPredicted RBP19.01■□□□□ 0.63
PDZD4-202ENST00000393758 CDK11BP21127 795 aaKnown RBP19.01■□□□□ 0.63
PDZD4-202ENST00000393758 CCT2P78371 535 aaKnown RBP19.01■□□□□ 0.63
PDZD4-202ENST00000393758 LARP1Q6PKG0 1096 aaKnown RBP19.01■□□□□ 0.63
PDZD4-202ENST00000393758 LGR6Q9HBX8 967 aa19.01■□□□□ 0.63
PDZD4-202ENST00000393758 NRBP1Q9UHY1 535 aa19.01■□□□□ 0.63
PDZD4-202ENST00000393758 SMC2O95347 1197 aa19.01■□□□□ 0.63
PDZD4-202ENST00000393758 DDX58O95786 925 aaKnown RBP19.01■□□□□ 0.63
PDZD4-202ENST00000393758 TTC6Q86TZ1 520 aa19.01■□□□□ 0.63
PDZD4-202ENST00000393758 ERC1Q8IUD2 1116 aa19.01■□□□□ 0.63
PDZD4-202ENST00000393758 LSG1Q9H089 658 aaKnown RBP19.01■□□□□ 0.63
PDZD4-202ENST00000393758 SMAP1Q8IYB5 467 aaPredicted RBP19■□□□□ 0.63
PDZD4-202ENST00000393758 SSH3Q8TE77 659 aa19■□□□□ 0.63
PDZD4-202ENST00000393758 EVI5LQ96CN4 794 aa19■□□□□ 0.63
PDZD4-202ENST00000393758 EDC3Q96F86 508 aaKnown RBP19■□□□□ 0.63
PDZD4-202ENST00000393758 STAP2Q9UGK3 403 aa19■□□□□ 0.63
PDZD4-202ENST00000393758 DEPDC5O75140 1603 aa19■□□□□ 0.63
PDZD4-202ENST00000393758 AATKQ6ZMQ8 1374 aa18.99■□□□□ 0.63
PDZD4-202ENST00000393758 MROH1Q8NDA8 1641 aa18.99■□□□□ 0.63
PDZD4-202ENST00000393758 KIDINS220Q9ULH0 1771 aa18.99■□□□□ 0.63
PDZD4-202ENST00000393758 ZC3H13Q5T200 1668 aaKnown RBP18.99■□□□□ 0.63
PDZD4-202ENST00000393758 ANKRD1Q15327 319 aa18.99■□□□□ 0.63
PDZD4-202ENST00000393758 ERCC4Q92889 916 aaPredicted RBP18.99■□□□□ 0.63
PDZD4-202ENST00000393758 HYPKQ9NX55 129 aa18.99■□□□□ 0.63
PDZD4-202ENST00000393758 ARAP3Q8WWN8 1544 aa18.99■□□□□ 0.63
PDZD4-202ENST00000393758 MLH3Q9UHC1 1453 aa18.99■□□□□ 0.63
PDZD4-202ENST00000393758 CSB-PGBD3P0DP91 1061 aa18.98■□□□□ 0.63
PDZD4-202ENST00000393758 PIP4K2AP48426 406 aaPredicted RBP18.98■□□□□ 0.63
PDZD4-202ENST00000393758 VPS53Q5VIR6 699 aa18.98■□□□□ 0.63
PDZD4-202ENST00000393758 A0A087WWV3 80 aa18.98■□□□□ 0.63
PDZD4-202ENST00000393758 TPCN1Q9ULQ1 816 aa18.98■□□□□ 0.63
PDZD4-202ENST00000393758 CBX8Q9HC52 389 aa18.98■□□□□ 0.63
PDZD4-202ENST00000393758 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
PDZD4-202ENST00000393758 NEXMIFQ5QGS0 1516 aa18.98■□□□□ 0.63
PDZD4-202ENST00000393758 BRF1Q92994 677 aa18.97■□□□□ 0.63
PDZD4-202ENST00000393758 CCDC171Q6TFL3 1326 aa18.97■□□□□ 0.63
PDZD4-202ENST00000393758 FLT4P35916 1363 aa18.97■□□□□ 0.63
PDZD4-202ENST00000393758 ERICH4A6NGS2 130 aa18.97■□□□□ 0.63
PDZD4-202ENST00000393758 HIP1O00291 1037 aa18.97■□□□□ 0.63
PDZD4-202ENST00000393758 LRRC59Q96AG4 307 aaKnown RBP18.97■□□□□ 0.63
PDZD4-202ENST00000393758 JAK2O60674 1132 aa18.96■□□□□ 0.63
PDZD4-202ENST00000393758 CCAR2Q8N163 923 aaKnown RBP18.96■□□□□ 0.63
PDZD4-202ENST00000393758 ATP7BP35670 1465 aa18.96■□□□□ 0.63
PDZD4-202ENST00000393758 ARHGEF40Q8TER5 1519 aa18.96■□□□□ 0.63
PDZD4-202ENST00000393758 MYO3AQ8NEV4 1616 aa18.96■□□□□ 0.63
PDZD4-202ENST00000393758 PTPN14Q15678 1187 aa18.96■□□□□ 0.63
PDZD4-202ENST00000393758 ISM2Q6H9L7 571 aa18.96■□□□□ 0.63
PDZD4-202ENST00000393758 RAB11FIP4Q86YS3 637 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms