RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 ZNF790Q6PG37 636 aa25.07■■□□□ 1.6
SKI-201ENST00000378536 CEBPZQ03701 1054 aaKnown RBP25.07■■□□□ 1.6
SKI-201ENST00000378536 LMBR1LQ6UX01 489 aa25.07■■□□□ 1.6
SKI-201ENST00000378536 KINO60870 393 aaKnown RBP25.07■■□□□ 1.6
SKI-201ENST00000378536 JMYQ8N9B5 988 aa25.07■■□□□ 1.6
SKI-201ENST00000378536 ABCA9Q8IUA7 1624 aa25.07■■□□□ 1.6
SKI-201ENST00000378536 MINDY4BA8MYZ0 360 aa25.06■■□□□ 1.6
SKI-201ENST00000378536 TRAK2O60296 914 aa25.06■■□□□ 1.6
SKI-201ENST00000378536 POLR3DP05423 398 aaPredicted RBP25.06■■□□□ 1.6
SKI-201ENST00000378536 NAT10Q9H0A0 1025 aaKnown RBP25.06■■□□□ 1.6
SKI-201ENST00000378536 TRIM35Q9UPQ4 493 aa25.06■■□□□ 1.6
SKI-201ENST00000378536 ROBO2Q9HCK4 1378 aa25.06■■□□□ 1.6
SKI-201ENST00000378536 LETM1O95202 739 aaPredicted RBP25.06■■□□□ 1.6
SKI-201ENST00000378536 SOGA3Q5TF21 947 aa25.06■■□□□ 1.6
SKI-201ENST00000378536 OLFM4Q6UX06 510 aa25.06■■□□□ 1.6
SKI-201ENST00000378536 UTP14AQ9BVJ6 771 aaKnown RBP25.06■■□□□ 1.6
SKI-201ENST00000378536 FAM135BQ49AJ0 1406 aa25.05■■□□□ 1.6
SKI-201ENST00000378536 SLF2Q8IX21 1173 aa25.05■■□□□ 1.6
SKI-201ENST00000378536 TXLNAP40222 546 aa25.05■■□□□ 1.6
SKI-201ENST00000378536 ZMYM4Q5VZL5 1548 aa25.05■■□□□ 1.6
SKI-201ENST00000378536 DDX21Q9NR30 783 aaKnown RBP eCLIP25.05■■□□□ 1.6
SKI-201ENST00000378536 TNNQ9UQP3 1299 aa25.04■■□□□ 1.6
SKI-201ENST00000378536 ANO8Q9HCE9 1232 aaPredicted RBP25.04■■□□□ 1.6
SKI-201ENST00000378536 TSHZ3Q63HK5 1081 aa25.04■■□□□ 1.6
SKI-201ENST00000378536 ANKRD18AQ8IVF6 992 aa25.04■■□□□ 1.6
SKI-201ENST00000378536 UPF3BQ9BZI7 483 aaKnown RBP25.04■■□□□ 1.6
SKI-201ENST00000378536 TBC1D9Q6ZT07 1266 aa25.04■■□□□ 1.6
SKI-201ENST00000378536 SNRKQ9NRH2 765 aa25.04■■□□□ 1.6
SKI-201ENST00000378536 HMGB1P09429 215 aaKnown RBP25.04■■□□□ 1.6
SKI-201ENST00000378536 CAVIN1Q6NZI2 390 aaKnown RBP25.04■■□□□ 1.6
SKI-201ENST00000378536 ZNF219Q9P2Y4 722 aaPredicted RBP25.04■■□□□ 1.6
SKI-201ENST00000378536 CIZ1Q9ULV3 898 aaPredicted RBP25.04■■□□□ 1.6
SKI-201ENST00000378536 UQCRFS1P1P0C7P4 283 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 PHAXQ9H814 394 aaKnown RBP25.03■■□□□ 1.6
SKI-201ENST00000378536 RTCBQ9Y3I0 505 aaKnown RBP25.03■■□□□ 1.6
SKI-201ENST00000378536 CHL1O00533 1208 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 CWF19L2Q2TBE0 894 aaKnown RBP25.03■■□□□ 1.6
SKI-201ENST00000378536 SLC52A2Q9HAB3 445 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 LGR6Q9HBX8 967 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 ATP7BP35670 1465 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 HOXB7P09629 217 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 KRT85P78386 507 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 WASF1Q92558 559 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 NLRP3Q96P20 1036 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 INSRP06213 1382 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 ZNF213O14771 459 aa25.03■■□□□ 1.6
SKI-201ENST00000378536 RLBP1P12271 317 aa25.02■■□□□ 1.6
SKI-201ENST00000378536 PDIA4P13667 645 aaKnown RBP25.02■■□□□ 1.6
SKI-201ENST00000378536 CEP89Q96ST8 783 aa25.02■■□□□ 1.6
SKI-201ENST00000378536 CDK5RAP3Q96JB5 506 aa25.02■■□□□ 1.6
SKI-201ENST00000378536 MKNK2Q9HBH9 465 aa25.02■■□□□ 1.6
SKI-201ENST00000378536 SYNMO15061 1565 aa25.02■■□□□ 1.6
SKI-201ENST00000378536 IL15P40933 162 aaPredicted RBP25.02■■□□□ 1.6
SKI-201ENST00000378536 NYXQ9GZU5 481 aa25.02■■□□□ 1.6
SKI-201ENST00000378536 UNC13BO14795 1591 aa25.01■■□□□ 1.59
SKI-201ENST00000378536 CDC42BPBQ9Y5S2 1711 aa25.01■■□□□ 1.59
SKI-201ENST00000378536 ZNF622Q969S3 477 aaKnown RBP eCLIP25.01■■□□□ 1.591e-6■□□□□ 10.8
SKI-201ENST00000378536 NOL7Q9UMY1 257 aaKnown RBP25■■□□□ 1.59
SKI-201ENST00000378536 CCAR1Q8IX12 1150 aaKnown RBP25■■□□□ 1.59
SKI-201ENST00000378536 BLMP54132 1417 aaPredicted RBP25■■□□□ 1.59
SKI-201ENST00000378536 CRACR2BQ8N4Y2 399 aaPredicted RBP24.99■■□□□ 1.59
SKI-201ENST00000378536 ATP2B3Q16720 1220 aa24.99■■□□□ 1.59
SKI-201ENST00000378536 CEP85Q6P2H3 762 aa24.99■■□□□ 1.59
SKI-201ENST00000378536 RNF41Q9H4P4 317 aaPredicted RBP24.99■■□□□ 1.59
SKI-201ENST00000378536 MPHOSPH10O00566 681 aaKnown RBP24.99■■□□□ 1.59
SKI-201ENST00000378536 CROCC2H7BZ55 1655 aa24.98■■□□□ 1.59
SKI-201ENST00000378536 ME1P48163 572 aa24.98■■□□□ 1.59
SKI-201ENST00000378536 PDE1AP54750 535 aa24.98■■□□□ 1.59
SKI-201ENST00000378536 SPTY2D1Q68D10 685 aaPredicted RBP24.98■■□□□ 1.59
SKI-201ENST00000378536 ZBTB40Q9NUA8 1239 aa24.98■■□□□ 1.59
SKI-201ENST00000378536 IPO7O95373 1038 aaKnown RBP24.97■■□□□ 1.59
SKI-201ENST00000378536 LDHCP07864 332 aa24.97■■□□□ 1.59
SKI-201ENST00000378536 CCDC83Q8IWF9 413 aa24.97■■□□□ 1.59
SKI-201ENST00000378536 NOC3LQ8WTT2 800 aaKnown RBP24.97■■□□□ 1.59
SKI-201ENST00000378536 SH2B1Q9NRF2 756 aaPredicted RBP24.97■■□□□ 1.59
SKI-201ENST00000378536 TPTE2Q6XPS3 522 aa24.97■■□□□ 1.59
SKI-201ENST00000378536 DDX11Q96FC9 970 aa24.97■■□□□ 1.59
SKI-201ENST00000378536 CLTCL1P53675 1640 aa24.96■■□□□ 1.59
SKI-201ENST00000378536 AATKQ6ZMQ8 1374 aa24.96■■□□□ 1.59
SKI-201ENST00000378536 IRS4O14654 1257 aaPredicted RBP24.96■■□□□ 1.59
SKI-201ENST00000378536 G2E3Q7L622 706 aa24.96■■□□□ 1.59
SKI-201ENST00000378536 PA2G4Q9UQ80 394 aaKnown RBP24.96■■□□□ 1.59
SKI-201ENST00000378536 CFAP45Q9UL16 551 aa24.95■■□□□ 1.59
SKI-201ENST00000378536 IQCA1Q86XH1 822 aa24.95■■□□□ 1.58
SKI-201ENST00000378536 RANBP6O60518 1105 aaKnown RBP24.95■■□□□ 1.58
SKI-201ENST00000378536 SDSP20132 328 aa24.95■■□□□ 1.58
SKI-201ENST00000378536 PLBD2Q8NHP8 589 aa24.94■■□□□ 1.58
SKI-201ENST00000378536 MAP3K4Q9Y6R4 1608 aa24.94■■□□□ 1.58
SKI-201ENST00000378536 ZNF444Q8N0Y2 327 aaPredicted RBP24.94■■□□□ 1.58
SKI-201ENST00000378536 A2ML1A8K2U0 1454 aa24.94■■□□□ 1.58
SKI-201ENST00000378536 FAM98CQ17RN3 349 aaKnown RBP24.94■■□□□ 1.58
SKI-201ENST00000378536 DCTPP1Q9H773 170 aa24.94■■□□□ 1.58
SKI-201ENST00000378536 TFCP2L1Q9NZI6 479 aa24.94■■□□□ 1.58
SKI-201ENST00000378536 CCDC196A0A1B0GTZ2 297 aa24.93■■□□□ 1.58
SKI-201ENST00000378536 SPATA32Q96LK8 384 aa24.93■■□□□ 1.58
SKI-201ENST00000378536 USP6P35125 1406 aa24.93■■□□□ 1.58
SKI-201ENST00000378536 BAG3O95817 575 aa24.93■■□□□ 1.58
SKI-201ENST00000378536 PIBF1Q8WXW3 757 aa24.92■■□□□ 1.58
SKI-201ENST00000378536 RNF214Q8ND24 703 aa24.92■■□□□ 1.58
SKI-201ENST00000378536 GNPATO15228 680 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms