RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
PTPRK-205ENST00000368213 STIM1Q13586 685 aa12.64□□□□□ -0.39
PTPRK-205ENST00000368213 MTHFSDQ2M296 383 aaKnown RBP12.64□□□□□ -0.39
PTPRK-205ENST00000368213 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
PTPRK-205ENST00000368213 TRIM21P19474 475 aaKnown RBP12.64□□□□□ -0.39
PTPRK-205ENST00000368213 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
PTPRK-205ENST00000368213 PICALMQ13492 652 aa12.64□□□□□ -0.39
PTPRK-205ENST00000368213 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
PTPRK-205ENST00000368213 TSPY2A6NKD2 308 aa12.64□□□□□ -0.39
PTPRK-205ENST00000368213 H0YIN7 160 aa12.64□□□□□ -0.39
PTPRK-205ENST00000368213 EYA1Q99502 592 aa12.64□□□□□ -0.39
PTPRK-205ENST00000368213 ZNF408Q9H9D4 720 aa12.63□□□□□ -0.39
PTPRK-205ENST00000368213 RARSP54136 660 aaKnown RBP12.63□□□□□ -0.39
PTPRK-205ENST00000368213 PDILTQ8N807 584 aa12.63□□□□□ -0.39
PTPRK-205ENST00000368213 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
PTPRK-205ENST00000368213 POLKQ9UBT6 870 aa12.63□□□□□ -0.39
PTPRK-205ENST00000368213 CFAP74Q9C0B2 1584 aa12.63□□□□□ -0.39
PTPRK-205ENST00000368213 SHANK2Q9UPX8 1470 aa12.63□□□□□ -0.39
PTPRK-205ENST00000368213 EIF6P56537 245 aaKnown RBP12.63□□□□□ -0.39
PTPRK-205ENST00000368213 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
PTPRK-205ENST00000368213 FILIP1LQ4L180 1135 aa12.63□□□□□ -0.39
PTPRK-205ENST00000368213 ABCA5Q8WWZ7 1642 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 RNMTO43148 476 aaKnown RBP12.62□□□□□ -0.39
PTPRK-205ENST00000368213 ME1P48163 572 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 TANGO6Q9C0B7 1094 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 SLC12A7Q9Y666 1083 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 MAP3K5Q99683 1374 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-205ENST00000368213 CCDC184Q52MB2 194 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 ANKRD2Q9GZV1 360 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 IFIT3O14879 490 aaKnown RBP12.62□□□□□ -0.39
PTPRK-205ENST00000368213 LARP1BQ659C4 914 aaKnown RBP12.62□□□□□ -0.39
PTPRK-205ENST00000368213 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-205ENST00000368213 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 TMEM94Q12767 1356 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 HOMER1Q86YM7 354 aa12.62□□□□□ -0.39
PTPRK-205ENST00000368213 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
PTPRK-205ENST00000368213 BRPF1P55201 1214 aaPredicted RBP12.61□□□□□ -0.39
PTPRK-205ENST00000368213 YEATS2Q9ULM3 1422 aa12.61□□□□□ -0.39
PTPRK-205ENST00000368213 FIBPO43427 364 aa12.61□□□□□ -0.39
PTPRK-205ENST00000368213 CASTP20810 708 aaKnown RBP12.61□□□□□ -0.39
PTPRK-205ENST00000368213 CYP7A1P22680 504 aa12.61□□□□□ -0.39
PTPRK-205ENST00000368213 LTKP29376 864 aa12.61□□□□□ -0.39
PTPRK-205ENST00000368213 TNNI2P48788 182 aa12.61□□□□□ -0.39
PTPRK-205ENST00000368213 LMBR1LQ6UX01 489 aa12.61□□□□□ -0.39
PTPRK-205ENST00000368213 KSR2Q6VAB6 950 aa12.61□□□□□ -0.39
PTPRK-205ENST00000368213 KAT14Q9H8E8 782 aa12.61□□□□□ -0.39
PTPRK-205ENST00000368213 PRPF40BQ6NWY9 871 aaKnown RBP12.61□□□□□ -0.39
PTPRK-205ENST00000368213 VAT1LQ9HCJ6 419 aa12.61□□□□□ -0.39
PTPRK-205ENST00000368213 CCDC82Q8N4S0 544 aa12.61□□□□□ -0.39
PTPRK-205ENST00000368213 DNAI2Q9GZS0 605 aa12.6□□□□□ -0.39
PTPRK-205ENST00000368213 RDXP35241 583 aaKnown RBP12.6□□□□□ -0.39
PTPRK-205ENST00000368213 NPHP4O75161 1426 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-205ENST00000368213 TSPOAP1O95153 1857 aa12.6□□□□□ -0.39
PTPRK-205ENST00000368213 NAA16Q6N069 864 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-205ENST00000368213 PUS7Q96PZ0 661 aaKnown RBP12.6□□□□□ -0.39
PTPRK-205ENST00000368213 ECHDC1Q9NTX5 307 aa12.6□□□□□ -0.39
PTPRK-205ENST00000368213 PRAG1Q86YV5 1406 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 GRM8O00222 908 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 ZNF592Q92610 1267 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 CEP131Q9UPN4 1083 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 LARGE2Q8N3Y3 721 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 DDX11Q96FC9 970 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 KIF5BP33176 963 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 IL16Q14005 1332 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 RALGAPBQ86X10 1494 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 ALDH1L1O75891 902 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
PTPRK-205ENST00000368213 PTPRKQ15262 1439 aa12.58□□□□□ -0.39
PTPRK-205ENST00000368213 PLS1Q14651 629 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 MSL1Q68DK7 614 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 MFSD6Q6ZSS7 791 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 TSPY3P0CV98 308 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 TSPY8P0CW00 308 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 FLAD1Q8NFF5 587 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 NKTRP30414 1462 aaKnown RBP12.58□□□□□ -0.4
PTPRK-205ENST00000368213 GOLGA8AA7E2F4 631 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 GOLGA8BA8MQT2 603 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 UFL1O94874 794 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 PARP10Q53GL7 1025 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 A0A1W2PP64 1363 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 STX8Q9UNK0 236 aa12.58□□□□□ -0.4
PTPRK-205ENST00000368213 NLRP5P59047 1200 aa12.57□□□□□ -0.4
PTPRK-205ENST00000368213 CCDC173Q0VFZ6 552 aa12.57□□□□□ -0.4
PTPRK-205ENST00000368213 CEP57L1Q8IYX8 460 aa12.57□□□□□ -0.4
PTPRK-205ENST00000368213 CCDC12Q8WUD4 166 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-205ENST00000368213 HMGB1P09429 215 aaKnown RBP12.57□□□□□ -0.4
PTPRK-205ENST00000368213 DACH1Q9UI36 760 aa12.57□□□□□ -0.4
PTPRK-205ENST00000368213 CCDC194A0A1B0GVG4 234 aa12.57□□□□□ -0.4
PTPRK-205ENST00000368213 DEKP35659 375 aaKnown RBP12.57□□□□□ -0.4
PTPRK-205ENST00000368213 IL15P40933 162 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-205ENST00000368213 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
PTPRK-205ENST00000368213 RAB34Q9BZG1 259 aa12.57□□□□□ -0.4
PTPRK-205ENST00000368213 DESP17661 470 aa12.57□□□□□ -0.4
PTPRK-205ENST00000368213 TMEM266Q2M3C6 531 aa12.57□□□□□ -0.4
PTPRK-205ENST00000368213 EIF2AK4Q9P2K8 1649 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms