RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 GDF10P55107 478 aa4.37□□□□□ -1.71
RNU4-11P-201ENST00000365287 NEUROD1Q13562 356 aa4.37□□□□□ -1.71
RNU4-11P-201ENST00000365287 TRAPPC3LQ5T215 181 aa4.37□□□□□ -1.71
RNU4-11P-201ENST00000365287 C20orf204Q6ZNR8 217 aa4.37□□□□□ -1.71
RNU4-11P-201ENST00000365287 C8orf86Q6ZUL3 223 aa4.37□□□□□ -1.71
RNU4-11P-201ENST00000365287 FAM117AQ9C073 453 aa4.37□□□□□ -1.71
RNU4-11P-201ENST00000365287 GPR37L1O60883 481 aa4.36□□□□□ -1.71
RNU4-11P-201ENST00000365287 LILRB5O75023 590 aa4.36□□□□□ -1.71
RNU4-11P-201ENST00000365287 BICDL1Q6ZP65 573 aa4.36□□□□□ -1.71
RNU4-11P-201ENST00000365287 KDM4CQ9H3R0 1056 aa4.36□□□□□ -1.71
RNU4-11P-201ENST00000365287 PCMTD2Q9NV79 361 aa4.36□□□□□ -1.71
RNU4-11P-201ENST00000365287 IQSEC3Q9UPP2 1182 aaPredicted RBP4.36□□□□□ -1.71
RNU4-11P-201ENST00000365287 GPC6Q9Y625 555 aaPredicted RBP4.36□□□□□ -1.71
RNU4-11P-201ENST00000365287 NDUFB9Q9Y6M9 179 aa4.36□□□□□ -1.71
RNU4-11P-201ENST00000365287 CDK2AP1O14519 115 aa4.35□□□□□ -1.71
RNU4-11P-201ENST00000365287 IRAK1P51617 712 aa4.35□□□□□ -1.71
RNU4-11P-201ENST00000365287 MTFR1Q15390 333 aa4.35□□□□□ -1.71
RNU4-11P-201ENST00000365287 SLC51AQ86UW1 340 aa4.35□□□□□ -1.71
RNU4-11P-201ENST00000365287 GOPCQ9HD26 462 aa4.35□□□□□ -1.71
RNU4-11P-201ENST00000365287 USP21Q9UK80 565 aa4.35□□□□□ -1.71
RNU4-11P-201ENST00000365287 APBB1O00213 710 aa4.34□□□□□ -1.71
RNU4-11P-201ENST00000365287 SPEM2Q0P670 501 aa4.34□□□□□ -1.71
RNU4-11P-201ENST00000365287 FZD5Q13467 585 aa4.34□□□□□ -1.71
RNU4-11P-201ENST00000365287 SHISA2Q6UWI4 295 aa4.34□□□□□ -1.71
RNU4-11P-201ENST00000365287 SLC4A9Q96Q91 983 aa4.34□□□□□ -1.71
RNU4-11P-201ENST00000365287 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
RNU4-11P-201ENST00000365287 CHIC2Q9UKJ5 165 aa4.34□□□□□ -1.71
RNU4-11P-201ENST00000365287 A6NJY4 79 aa4.33□□□□□ -1.72
RNU4-11P-201ENST00000365287 OXLD1Q5BKU9 147 aa4.33□□□□□ -1.72
RNU4-11P-201ENST00000365287 FMR1NBQ8N0W7 255 aaPredicted RBP4.33□□□□□ -1.72
RNU4-11P-201ENST00000365287 PHTF2Q8N3S3 785 aa4.33□□□□□ -1.72
RNU4-11P-201ENST00000365287 PCMTD1Q96MG8 357 aaPredicted RBP4.33□□□□□ -1.72
RNU4-11P-201ENST00000365287 SLC30A3Q99726 388 aa4.33□□□□□ -1.72
RNU4-11P-201ENST00000365287 CABP1Q9NZU7 370 aa4.33□□□□□ -1.72
RNU4-11P-201ENST00000365287 CD97P48960 835 aa4.32□□□□□ -1.72
RNU4-11P-201ENST00000365287 SLFNL1Q499Z3 407 aa4.32□□□□□ -1.72
RNU4-11P-201ENST00000365287 GPBP1L1Q9HC44 474 aaPredicted RBP4.32□□□□□ -1.72
RNU4-11P-201ENST00000365287 EIF4G2P78344 907 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU4-11P-201ENST00000365287 SFSWAPQ12872 951 aaKnown RBP4.31□□□□□ -1.72
RNU4-11P-201ENST00000365287 TSGA10IPQ3SY00 556 aa4.31□□□□□ -1.72
RNU4-11P-201ENST00000365287 LRRC69Q6ZNQ3 347 aa4.31□□□□□ -1.72
RNU4-11P-201ENST00000365287 PRR23CQ6ZRP0 262 aa4.31□□□□□ -1.72
RNU4-11P-201ENST00000365287 DTWD1Q8N5C7 304 aa4.31□□□□□ -1.72
RNU4-11P-201ENST00000365287 RNF114Q9Y508 228 aa4.31□□□□□ -1.72
RNU4-11P-201ENST00000365287 USP3Q9Y6I4 520 aa4.31□□□□□ -1.72
RNU4-11P-201ENST00000365287 TMEM229AB2RXF0 380 aa4.3□□□□□ -1.72
RNU4-11P-201ENST00000365287 EML1O00423 815 aa4.3□□□□□ -1.72
RNU4-11P-201ENST00000365287 TAL1P17542 331 aaPredicted RBP4.3□□□□□ -1.72
RNU4-11P-201ENST00000365287 TXLNAP40222 546 aa4.3□□□□□ -1.72
RNU4-11P-201ENST00000365287 KCNQ4P56696 695 aa4.3□□□□□ -1.72
RNU4-11P-201ENST00000365287 BANK1Q8NDB2 785 aa4.3□□□□□ -1.72
RNU4-11P-201ENST00000365287 WFDC12Q8WWY7 111 aa4.3□□□□□ -1.72
RNU4-11P-201ENST00000365287 NEUROD4Q9HD90 331 aa4.3□□□□□ -1.72
RNU4-11P-201ENST00000365287 JPH1Q9HDC5 661 aaPredicted RBP4.3□□□□□ -1.72
RNU4-11P-201ENST00000365287 SERTAD1Q9UHV2 236 aa4.3□□□□□ -1.72
RNU4-11P-201ENST00000365287 KIAA1324LA8MWY0 1029 aaPredicted RBP4.29□□□□□ -1.72
RNU4-11P-201ENST00000365287 FSTP19883 344 aa4.29□□□□□ -1.72
RNU4-11P-201ENST00000365287 SSTR4P31391 388 aa4.29□□□□□ -1.72
RNU4-11P-201ENST00000365287 TEAD4Q15561 434 aa4.29□□□□□ -1.72
RNU4-11P-201ENST00000365287 MAP7D1Q3KQU3 841 aa4.29□□□□□ -1.72
RNU4-11P-201ENST00000365287 ILDR2Q71H61 639 aa4.29□□□□□ -1.72
RNU4-11P-201ENST00000365287 RAB44Q7Z6P3 723 aaPredicted RBP4.29□□□□□ -1.72
RNU4-11P-201ENST00000365287 SLC6A14Q9UN76 642 aa4.29□□□□□ -1.72
RNU4-11P-201ENST00000365287 BACH1O14867 736 aa4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 NOS3P29474 1203 aa4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 IREB2P48200 963 aaKnown RBP4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 AFF1P51825 1210 aaKnown RBP4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 MTMR14Q8NCE2 650 aa4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 ZDHHC1Q8WTX9 485 aa4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 L3MBTL2Q969R5 705 aa4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 EFCC1Q9HA90 598 aa4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 BRD7Q9NPI1 651 aa4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 SCHIP1Q9P0W5 487 aaPredicted RBP4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 PARP3Q9Y6F1 533 aa4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 OAS3Q9Y6K5 1087 aaKnown RBP4.28□□□□□ -1.72
RNU4-11P-201ENST00000365287 GP2P55259 537 aaKnown RBP4.27□□□□□ -1.73
RNU4-11P-201ENST00000365287 FBXO11Q86XK2 927 aa4.27□□□□□ -1.73
RNU4-11P-201ENST00000365287 C7orf43Q8WVR3 580 aa4.27□□□□□ -1.73
RNU4-11P-201ENST00000365287 MEGF10Q96KG7 1140 aa4.27□□□□□ -1.73
RNU4-11P-201ENST00000365287 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
RNU4-11P-201ENST00000365287 UBE2OQ9C0C9 1292 aaKnown RBP4.27□□□□□ -1.73
RNU4-11P-201ENST00000365287 KCNH4Q9UQ05 1017 aa4.27□□□□□ -1.73
RNU4-11P-201ENST00000365287 GSC2O15499 205 aa4.26□□□□□ -1.73
RNU4-11P-201ENST00000365287 NOS2P35228 1153 aa4.26□□□□□ -1.73
RNU4-11P-201ENST00000365287 PSAPL1Q6NUJ1 521 aa4.26□□□□□ -1.73
RNU4-11P-201ENST00000365287 IGF2-ASQ6U949 168 aa4.26□□□□□ -1.73
RNU4-11P-201ENST00000365287 DMRTC2Q8IXT2 367 aaPredicted RBP4.26□□□□□ -1.73
RNU4-11P-201ENST00000365287 PLPP7Q8NBV4 271 aa4.26□□□□□ -1.73
RNU4-11P-201ENST00000365287 RHPN1Q8TCX5 695 aa4.26□□□□□ -1.73
RNU4-11P-201ENST00000365287 NUDT8Q8WV74 236 aa4.26□□□□□ -1.73
RNU4-11P-201ENST00000365287 BHMTQ93088 406 aa4.26□□□□□ -1.73
RNU4-11P-201ENST00000365287 ANKIB1Q9P2G1 1089 aa4.26□□□□□ -1.73
RNU4-11P-201ENST00000365287 PTCD1O75127 700 aaKnown RBP4.25□□□□□ -1.73
RNU4-11P-201ENST00000365287 RGS9O75916 674 aaPredicted RBP4.25□□□□□ -1.73
RNU4-11P-201ENST00000365287 TYRO3Q06418 890 aa4.25□□□□□ -1.73
RNU4-11P-201ENST00000365287 TBC1D8BQ0IIM8 1120 aa4.25□□□□□ -1.73
RNU4-11P-201ENST00000365287 C1orf53Q5VUE5 145 aa4.25□□□□□ -1.73
RNU4-11P-201ENST00000365287 MSL1Q68DK7 614 aa4.25□□□□□ -1.73
RNU4-11P-201ENST00000365287 DZIP1LQ8IYY4 767 aaKnown RBP4.25□□□□□ -1.73
RNU4-11P-201ENST00000365287 CEP63Q96MT8 703 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms