RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 WASF1Q92558 559 aa20.04■□□□□ 0.8
ARID1B-202ENST00000346085 MUM1Q2TAK8 710 aa20.03■□□□□ 0.8
ARID1B-202ENST00000346085 GTF3C6Q969F1 213 aa20.03■□□□□ 0.8
ARID1B-202ENST00000346085 WASHC4Q2M389 1173 aa20.03■□□□□ 0.8
ARID1B-202ENST00000346085 PIK3R5Q8WYR1 880 aa20.03■□□□□ 0.8
ARID1B-202ENST00000346085 SELENOSQ9BQE4 189 aa20.03■□□□□ 0.8
ARID1B-202ENST00000346085 CASTP20810 708 aaKnown RBP20.03■□□□□ 0.8
ARID1B-202ENST00000346085 TERF1P54274 439 aa20.03■□□□□ 0.8
ARID1B-202ENST00000346085 UIMC1Q96RL1 719 aa20.03■□□□□ 0.8
ARID1B-202ENST00000346085 CCDC196A0A1B0GTZ2 297 aa20.03■□□□□ 0.8
ARID1B-202ENST00000346085 ZHX3Q9H4I2 956 aa20.03■□□□□ 0.8
ARID1B-202ENST00000346085 GIGYF1O75420 1035 aaPredicted RBP20.02■□□□□ 0.8
ARID1B-202ENST00000346085 SLC4A8Q2Y0W8 1093 aa20.02■□□□□ 0.8
ARID1B-202ENST00000346085 MCUR1Q96AQ8 359 aa20.02■□□□□ 0.8
ARID1B-202ENST00000346085 FMN1Q68DA7 1419 aa20.02■□□□□ 0.8
ARID1B-202ENST00000346085 SCRIBQ14160 1630 aa20.02■□□□□ 0.8
ARID1B-202ENST00000346085 DNA2P51530 1060 aa20.02■□□□□ 0.8
ARID1B-202ENST00000346085 DDX19AQ9NUU7 478 aaKnown RBP20.02■□□□□ 0.8
ARID1B-202ENST00000346085 CCDC62Q6P9F0 684 aa20.02■□□□□ 0.8
ARID1B-202ENST00000346085 EFCC1Q9HA90 598 aa20.02■□□□□ 0.8
ARID1B-202ENST00000346085 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
ARID1B-202ENST00000346085 JAKMIP2Q96AA8 810 aa20.02■□□□□ 0.8
ARID1B-202ENST00000346085 PPP2R5AQ15172 486 aa20.02■□□□□ 0.79
ARID1B-202ENST00000346085 RASSF2P50749 326 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 Q9H521 79 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 MATR3P43243 847 aaKnown RBP eCLIP20.01■□□□□ 0.796e-7■■■■□ 23.7
ARID1B-202ENST00000346085 VPS41P49754 854 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 ANKRD24Q8TF21 1146 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 CSB-PGBD3P0DP91 1061 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 GFAPP14136 432 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 FYB2Q5VWT5 728 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 RAB11FIP4Q86YS3 637 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 ZSWIM4Q9H7M6 989 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 CCDC96Q2M329 555 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 ATP2A1O14983 1001 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 FAN1Q9Y2M0 1017 aa20.01■□□□□ 0.79
ARID1B-202ENST00000346085 SATB1Q01826 763 aa20■□□□□ 0.79
ARID1B-202ENST00000346085 SAFB2Q14151 953 aaKnown RBP eCLIP20■□□□□ 0.79
ARID1B-202ENST00000346085 PANK1Q8TE04 598 aa20■□□□□ 0.79
ARID1B-202ENST00000346085 VAV2P52735 878 aa20■□□□□ 0.79
ARID1B-202ENST00000346085 SMARCC2Q8TAQ2 1214 aa20■□□□□ 0.79
ARID1B-202ENST00000346085 PRPF4BQ13523 1007 aaKnown RBP20■□□□□ 0.79
ARID1B-202ENST00000346085 CXorf38Q8TB03 319 aa20■□□□□ 0.79
ARID1B-202ENST00000346085 PRPHP41219 470 aa20■□□□□ 0.79
ARID1B-202ENST00000346085 PABPN1LA6NDY0 278 aaKnown RBP19.99■□□□□ 0.79
ARID1B-202ENST00000346085 ACTN2P35609 894 aa19.99■□□□□ 0.79
ARID1B-202ENST00000346085 HVCN1Q96D96 273 aa19.99■□□□□ 0.79
ARID1B-202ENST00000346085 TBC1D31Q96DN5 1066 aa19.99■□□□□ 0.79
ARID1B-202ENST00000346085 PALMDQ9NP74 551 aa19.99■□□□□ 0.79
ARID1B-202ENST00000346085 GKAP1Q5VSY0 366 aaPredicted RBP19.98■□□□□ 0.79
ARID1B-202ENST00000346085 ATP2A3Q93084 1043 aa19.98■□□□□ 0.79
ARID1B-202ENST00000346085 TBC1D2BQ9UPU7 963 aa19.98■□□□□ 0.79
ARID1B-202ENST00000346085 TDRD12Q587J7 1177 aaKnown RBP19.98■□□□□ 0.79
ARID1B-202ENST00000346085 CFAP157Q5JU67 520 aa19.98■□□□□ 0.79
ARID1B-202ENST00000346085 KRT32Q14532 448 aa19.97■□□□□ 0.79
ARID1B-202ENST00000346085 MAP3K21Q5TCX8 1036 aa19.97■□□□□ 0.79
ARID1B-202ENST00000346085 ARHGEF2Q92974 986 aaKnown RBP19.97■□□□□ 0.79
ARID1B-202ENST00000346085 SRCIN1Q9C0H9 1055 aa19.97■□□□□ 0.79
ARID1B-202ENST00000346085 ATP2A2P16615 1042 aaKnown RBP19.97■□□□□ 0.79
ARID1B-202ENST00000346085 IGSF3O75054 1194 aa19.97■□□□□ 0.79
ARID1B-202ENST00000346085 ZFXP17010 805 aaPredicted RBP19.97■□□□□ 0.79
ARID1B-202ENST00000346085 PDCD2Q16342 344 aaPredicted RBP19.97■□□□□ 0.79
ARID1B-202ENST00000346085 PCYT1AP49585 367 aa19.97■□□□□ 0.79
ARID1B-202ENST00000346085 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
ARID1B-202ENST00000346085 TTC12Q9H892 705 aaPredicted RBP19.96■□□□□ 0.79
ARID1B-202ENST00000346085 OPHN1O60890 802 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 LCA5Q86VQ0 697 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 CAPZA3Q96KX2 299 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 BCAP29Q9UHQ4 241 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 FKBP5Q13451 457 aaPredicted RBP19.96■□□□□ 0.79
ARID1B-202ENST00000346085 KLHL40Q2TBA0 621 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 SSX2IPQ9Y2D8 614 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 CCDC69A6NI79 296 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 GOLGA6CA6NDK9 693 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 GOLGA6DP0CG33 693 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 ATICP31939 592 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 FAM160A1Q05DH4 1040 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 CALCOCO2Q13137 446 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 GOLGA6AQ9NYA3 693 aa19.96■□□□□ 0.79
ARID1B-202ENST00000346085 MSH5O43196 834 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 DMTNQ08495 405 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 NKIRAS1Q9NYS0 192 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 SCAPERQ9BY12 1400 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 DNAI1Q9UI46 699 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 MKL2Q9ULH7 1088 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 ZSCAN23Q3MJ62 389 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 TRIM68Q6AZZ1 485 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 PHLDB3Q6NSJ2 640 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
ARID1B-202ENST00000346085 ZC3H6P61129 1189 aaKnown RBP19.95■□□□□ 0.78
ARID1B-202ENST00000346085 BICD1Q96G01 975 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 PDZRN3Q9UPQ7 1066 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 ZSCAN26Q16670 478 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 NUB1Q9Y5A7 615 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 UBTFL1P0CB47 393 aaPredicted RBP19.95■□□□□ 0.78
ARID1B-202ENST00000346085 TMCO4Q5TGY1 634 aa19.95■□□□□ 0.78
ARID1B-202ENST00000346085 PDE3AQ14432 1141 aa19.94■□□□□ 0.78
ARID1B-202ENST00000346085 NOP2P46087 812 aaKnown RBP19.94■□□□□ 0.78
ARID1B-202ENST00000346085 LRSAM1Q6UWE0 723 aa19.94■□□□□ 0.78
ARID1B-202ENST00000346085 PDRG1Q9NUG6 133 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms