RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 NLRP2Q9NX02 1062 aa14.71□□□□□ -0.05
USP47-202ENST00000339865 KRT32Q14532 448 aa14.71□□□□□ -0.05
USP47-202ENST00000339865 CCDC171Q6TFL3 1326 aa14.71□□□□□ -0.05
USP47-202ENST00000339865 CCDC82Q8N4S0 544 aa14.71□□□□□ -0.05
USP47-202ENST00000339865 OPA1O60313 960 aa14.71□□□□□ -0.05
USP47-202ENST00000339865 GSTA5Q7RTV2 222 aa14.71□□□□□ -0.05
USP47-202ENST00000339865 SEC62Q99442 399 aaKnown RBP14.71□□□□□ -0.05
USP47-202ENST00000339865 PLVAPQ9BX97 442 aa14.71□□□□□ -0.05
USP47-202ENST00000339865 TRIM7Q9C029 511 aa14.71□□□□□ -0.05
USP47-202ENST00000339865 ATXN8OSP0DMR3 200 aa14.71□□□□□ -0.06
USP47-202ENST00000339865 VCX3BQ9H321 246 aa14.71□□□□□ -0.06
USP47-202ENST00000339865 SYNCQ9H7C4 482 aa14.71□□□□□ -0.06
USP47-202ENST00000339865 LRP2BPQ9P2M1 347 aa14.71□□□□□ -0.06
USP47-202ENST00000339865 KRT13P13646 458 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 CTNNA3Q9UI47 895 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 UACAQ9BZF9 1416 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 CASQ2O14958 399 aaPredicted RBP14.7□□□□□ -0.06
USP47-202ENST00000339865 CTAGE5O15320 804 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 RNF168Q8IYW5 571 aaPredicted RBP14.7□□□□□ -0.06
USP47-202ENST00000339865 NUF2Q9BZD4 464 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 STMN4Q9H169 189 aaPredicted RBP14.7□□□□□ -0.06
USP47-202ENST00000339865 PDIA4P13667 645 aaKnown RBP14.7□□□□□ -0.06
USP47-202ENST00000339865 SYCP3Q8IZU3 236 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 CCDC110Q8TBZ0 833 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 PSMD6Q15008 389 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 ZMAT2Q96NC0 199 aaKnown RBP14.7□□□□□ -0.06
USP47-202ENST00000339865 CFAP157Q5JU67 520 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 CHD1LQ86WJ1 897 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 TTC14Q96N46 770 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 RAB34Q9BZG1 259 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 SRCIN1Q9C0H9 1055 aa14.7□□□□□ -0.06
USP47-202ENST00000339865 RASSF4Q9H2L5 321 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 DDX54Q8TDD1 881 aaKnown RBP14.69□□□□□ -0.06
USP47-202ENST00000339865 C8orf76Q96K31 380 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 PRIMPOLQ96LW4 560 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 BUB1BO60566 1050 aaPredicted RBP14.69□□□□□ -0.06
USP47-202ENST00000339865 CCDC129Q6ZRS4 1044 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.69□□□□□ -0.06
USP47-202ENST00000339865 VGLL3A8MV65 326 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 MYL6BP14649 208 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 RASAL2Q9UJF2 1139 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 CEP85LQ5SZL2 805 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 MORC4Q8TE76 937 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 KCNK9Q9NPC2 374 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 TXNDC16Q9P2K2 825 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 CLNS1AP54105 237 aaKnown RBP14.69□□□□□ -0.06
USP47-202ENST00000339865 KANK4Q5T7N3 995 aaPredicted RBP14.69□□□□□ -0.06
USP47-202ENST00000339865 PFDN4Q9NQP4 134 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 ERCC5P28715 1186 aaPredicted RBP14.69□□□□□ -0.06
USP47-202ENST00000339865 PPFIBP2Q8ND30 876 aa14.69□□□□□ -0.06
USP47-202ENST00000339865 SETDB1Q15047 1291 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 LRRC45Q96CN5 670 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 RABGAP1Q9Y3P9 1069 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 PHACTR2O75167 634 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 CACNA2D3Q8IZS8 1091 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 CTAGE9A4FU28 777 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
USP47-202ENST00000339865 KIF5AQ12840 1032 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 DACT3Q96B18 629 aaPredicted RBP14.68□□□□□ -0.06
USP47-202ENST00000339865 SCAND2PQ9GZW5 306 aaPredicted RBP14.68□□□□□ -0.06
USP47-202ENST00000339865 CCDC40Q4G0X9 1142 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 EHBP1Q8NDI1 1231 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 MINDY4BA8MYZ0 360 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 BCAR3O75815 825 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 STX1AQ16623 288 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 SEPT8Q92599 483 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 GEN1Q17RS7 908 aa14.68□□□□□ -0.06
USP47-202ENST00000339865 PPFIA2O75334 1257 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 KRBA2Q6ZNG9 492 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 CDCA7LQ96GN5 454 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 PTGS1P23219 599 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 TMEM266Q2M3C6 531 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 CCDC25Q86WR0 208 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 GSDMBQ8TAX9 411 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 ZNF830Q96NB3 372 aaPredicted RBP14.67□□□□□ -0.06
USP47-202ENST00000339865 A0A1B0GUL7 405 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 IDH1O75874 414 aaKnown RBP14.67□□□□□ -0.06
USP47-202ENST00000339865 SAMD15Q9P1V8 674 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 SNX16P57768 344 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 LMNTD2Q8IXW0 634 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 SLC4A2P04920 1241 aa14.67□□□□□ -0.06
USP47-202ENST00000339865 CIB2O75838 187 aa14.66□□□□□ -0.06
USP47-202ENST00000339865 FSIP1Q8NA03 581 aa14.66□□□□□ -0.06
USP47-202ENST00000339865 TBC1D5Q92609 795 aa14.66□□□□□ -0.06
USP47-202ENST00000339865 TSPYL2Q9H2G4 693 aaPredicted RBP14.66□□□□□ -0.06
USP47-202ENST00000339865 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
USP47-202ENST00000339865 ABCF2Q9UG63 623 aa14.66□□□□□ -0.06
USP47-202ENST00000339865 AKNAQ7Z591 1439 aa14.66□□□□□ -0.06
USP47-202ENST00000339865 BICDL2A1A5D9 508 aa14.66□□□□□ -0.06
USP47-202ENST00000339865 CCDC77Q9BR77 488 aa14.66□□□□□ -0.06
USP47-202ENST00000339865 GOLIM4O00461 696 aa14.66□□□□□ -0.06
USP47-202ENST00000339865 GBP1P32455 592 aa14.66□□□□□ -0.06
USP47-202ENST00000339865 TACC3Q9Y6A5 838 aa14.66□□□□□ -0.06
USP47-202ENST00000339865 NEDD9Q14511 834 aa14.65□□□□□ -0.06
USP47-202ENST00000339865 WDR63Q8IWG1 891 aa14.65□□□□□ -0.06
USP47-202ENST00000339865 VPS52Q8N1B4 723 aa14.65□□□□□ -0.06
USP47-202ENST00000339865 LRRC43Q8N309 656 aa14.65□□□□□ -0.06
USP47-202ENST00000339865 GDPD2Q9HCC8 539 aa14.65□□□□□ -0.06
USP47-202ENST00000339865 MGEA5O60502 916 aa14.65□□□□□ -0.06
USP47-202ENST00000339865 INTS8Q75QN2 995 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms