RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
AMBRA1-201ENST00000314845 NBPF4Q96M43 638 aa13.91□□□□□ -0.18
AMBRA1-201ENST00000314845 RIMS2Q9UQ26 1411 aa13.91□□□□□ -0.18
AMBRA1-201ENST00000314845 NEFHP12036 1026 aa13.91□□□□□ -0.18
AMBRA1-201ENST00000314845 NLRP5P59047 1200 aa13.91□□□□□ -0.18
AMBRA1-201ENST00000314845 AKAP4Q5JQC9 854 aa13.91□□□□□ -0.18
AMBRA1-201ENST00000314845 PPP4R3AQ6IN85 833 aa13.91□□□□□ -0.18
AMBRA1-201ENST00000314845 CTAGE5O15320 804 aa13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 ARHGAP29Q52LW3 1261 aa13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 RHPN1Q8TCX5 695 aa13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 ANXA1P04083 346 aa13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 ZFYP08048 801 aaPredicted RBP13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 TSG101Q99816 390 aa13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 FGFR1OPO95684 399 aaKnown RBP13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 HLA-DOAP06340 250 aa13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 CCDC183Q5T5S1 534 aa13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 FAM177A1Q8N128 213 aaPredicted RBP13.9□□□□□ -0.18
AMBRA1-201ENST00000314845 DNAI2Q9GZS0 605 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 CABP5Q9NP86 173 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 CWC15Q9P013 229 aaKnown RBP13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 BIVM-ERCC5R4GMW8 1640 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 PPIP5K1Q6PFW1 1433 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 SYCE3A1L190 88 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 TSPY2A6NKD2 308 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 MPNDQ8N594 471 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 XAGE3Q8WTP9 111 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 TAF4BQ92750 862 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 USP16Q9Y5T5 823 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 ST5P78524 1137 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 TMEM67Q5HYA8 995 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 FKBP15Q5T1M5 1219 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 SFPQP23246 707 aaKnown RBP eCLIP13.89□□□□□ -0.192e-6■□□□□ 11
AMBRA1-201ENST00000314845 MFSD6Q6ZSS7 791 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 TBC1D9Q6ZT07 1266 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 COPS6Q7L5N1 327 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 KIAA1328Q86T90 577 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 FEZ1Q99689 392 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 C19orf44Q9H6X5 657 aa13.89□□□□□ -0.19
AMBRA1-201ENST00000314845 UBAP1LF5GYI3 381 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 CETN2P41208 172 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 GUCY1B3Q02153 619 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 NCOA7Q8NI08 942 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 RAPGEF6Q8TEU7 1601 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 CHPF2Q9P2E5 772 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 GSTO1P78417 241 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 CAMK4Q16566 473 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 ANKRD18AQ8IVF6 992 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 NEK1Q96PY6 1258 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 H0YHG0 523 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 SKIDA1Q1XH10 827 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 TTC22Q5TAA0 569 aa13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
AMBRA1-201ENST00000314845 BAG4O95429 457 aaKnown RBP13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 FBLN1P23142 703 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 CCT2P78371 535 aaKnown RBP13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 HDAC1Q13547 482 aaPredicted RBP13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 KSR2Q6VAB6 950 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 FLT4P35916 1363 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 TTLL12Q14166 644 aaPredicted RBP13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 KLHL10Q6JEL2 608 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 NLRP3Q96P20 1036 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 DDX19AQ9NUU7 478 aaKnown RBP13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 KIF2AO00139 706 aaPredicted RBP13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 DDB1Q16531 1140 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 WDR78Q5VTH9 848 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 VPS36Q86VN1 386 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 KAT14Q9H8E8 782 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 ORC3Q9UBD5 711 aaPredicted RBP13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 GRM8O00222 908 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 ATP2B3Q16720 1220 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 CCDC191Q8NCU4 936 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 ZNF622Q969S3 477 aaKnown RBP eCLIP13.87□□□□□ -0.196e-7■■■■■ 27
AMBRA1-201ENST00000314845 SETDB2Q96T68 719 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 TCP11L1Q9NUJ3 509 aa13.87□□□□□ -0.19
AMBRA1-201ENST00000314845 EIF4A2Q14240 407 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 SEPT7Q16181 437 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 SCLT1Q96NL6 688 aa13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 EIF3JO75822 258 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 ZRSR2Q15696 482 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 ZGPATQ8N5A5 531 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 CNNM3Q8NE01 707 aa13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 MEIS3Q99687 375 aa13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 PYM1Q9BRP8 204 aaKnown RBP13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 ASXL1Q8IXJ9 1541 aa13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 IL15P40933 162 aaPredicted RBP13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 SPA17Q15506 151 aa13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 JAKMIP3Q5VZ66 844 aa13.86□□□□□ -0.19
AMBRA1-201ENST00000314845 POLKQ9UBT6 870 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 NUP153P49790 1475 aaKnown RBP13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 MCM5P33992 734 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 MICU3Q86XE3 530 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 ANKRD44Q8N8A2 993 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 LINS1Q8NG48 757 aa13.85□□□□□ -0.19
AMBRA1-201ENST00000314845 TBC1D2Q9BYX2 928 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms