RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.02□□□□□ -0.974e-7■■■■□ 20.6
RSF1-201ENST00000308488 CCDC160A6NGH7 325 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 SMIM24O75264 130 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 CHGAP10645 457 aaKnown RBP9.02□□□□□ -0.97
RSF1-201ENST00000308488 GOLGA6CA6NDK9 693 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 NBPF7P0C2Y1 421 aaPredicted RBP9.02□□□□□ -0.97
RSF1-201ENST00000308488 GOLGA6DP0CG33 693 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 STMN4Q9H169 189 aaPredicted RBP9.02□□□□□ -0.97
RSF1-201ENST00000308488 GOLGA6AQ9NYA3 693 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 SAMD15Q9P1V8 674 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 CTAGE9A4FU28 777 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 CCDC69A6NI79 296 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 ZSCAN20P17040 1043 aaPredicted RBP9.02□□□□□ -0.97
RSF1-201ENST00000308488 ATP2B3Q16720 1220 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 CACNA2D4Q7Z3S7 1137 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 CTNNBL1Q8WYA6 563 aaPredicted RBP9.02□□□□□ -0.97
RSF1-201ENST00000308488 BRPF1P55201 1214 aaPredicted RBP9.02□□□□□ -0.97
RSF1-201ENST00000308488 JPH2Q9BR39 696 aaPredicted RBP9.02□□□□□ -0.97
RSF1-201ENST00000308488 GRIPAP1Q4V328 841 aa9.02□□□□□ -0.97
RSF1-201ENST00000308488 PDCD7Q8N8D1 485 aaKnown RBP9.02□□□□□ -0.97
RSF1-201ENST00000308488 KDM4AO75164 1064 aa9.01□□□□□ -0.97
RSF1-201ENST00000308488 TSC22D3Q99576 134 aa9.01□□□□□ -0.97
RSF1-201ENST00000308488 RNF8O76064 485 aa9.01□□□□□ -0.97
RSF1-201ENST00000308488 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
RSF1-201ENST00000308488 USP6NLQ92738 828 aa9.01□□□□□ -0.97
RSF1-201ENST00000308488 KIF2CQ99661 725 aa9.01□□□□□ -0.97
RSF1-201ENST00000308488 AIMP1Q12904 312 aaKnown RBP9.01□□□□□ -0.97
RSF1-201ENST00000308488 LRPPRCP42704 1394 aaKnown RBP9.01□□□□□ -0.97
RSF1-201ENST00000308488 NOL3O60936 208 aaKnown RBP9.01□□□□□ -0.97
RSF1-201ENST00000308488 PPFIA4O75335 1185 aa9.01□□□□□ -0.97
RSF1-201ENST00000308488 MVPQ14764 893 aaKnown RBP9.01□□□□□ -0.97
RSF1-201ENST00000308488 ALS2CR12Q96Q35 445 aa9.01□□□□□ -0.97
RSF1-201ENST00000308488 APAF1O14727 1248 aa9.01□□□□□ -0.97
RSF1-201ENST00000308488 PAIP2BQ9ULR5 123 aaKnown RBP9.01□□□□□ -0.97
RSF1-201ENST00000308488 PPP1R12BO60237 982 aaPredicted RBP9□□□□□ -0.97
RSF1-201ENST00000308488 PSMD2Q13200 908 aa9□□□□□ -0.97
RSF1-201ENST00000308488 LARP1BQ659C4 914 aaKnown RBP9□□□□□ -0.97
RSF1-201ENST00000308488 BSDC1Q9NW68 430 aaPredicted RBP9□□□□□ -0.97
RSF1-201ENST00000308488 CHUKO15111 745 aa9□□□□□ -0.97
RSF1-201ENST00000308488 NUCB1Q02818 461 aa9□□□□□ -0.97
RSF1-201ENST00000308488 TEX11Q8IYF3 940 aa9□□□□□ -0.97
RSF1-201ENST00000308488 TSC1Q92574 1164 aa9□□□□□ -0.97
RSF1-201ENST00000308488 PPFIA2O75334 1257 aa9□□□□□ -0.97
RSF1-201ENST00000308488 TYRO3Q06418 890 aa9□□□□□ -0.97
RSF1-201ENST00000308488 STIM1Q13586 685 aa9□□□□□ -0.97
RSF1-201ENST00000308488 IQCA1Q86XH1 822 aa9□□□□□ -0.97
RSF1-201ENST00000308488 SSBP05455 408 aaKnown RBP eCLIP9□□□□□ -0.97
RSF1-201ENST00000308488 CHD1LQ86WJ1 897 aa9□□□□□ -0.97
RSF1-201ENST00000308488 EPB41L3Q9Y2J2 1087 aaPredicted RBP9□□□□□ -0.97
RSF1-201ENST00000308488 CETN3O15182 167 aa9□□□□□ -0.97
RSF1-201ENST00000308488 IQCGQ9H095 443 aaKnown RBP9□□□□□ -0.97
RSF1-201ENST00000308488 GPR161Q8N6U8 529 aaKnown RBP9□□□□□ -0.97
RSF1-201ENST00000308488 NKTRP30414 1462 aaKnown RBP9□□□□□ -0.97
RSF1-201ENST00000308488 CPLX4Q7Z7G2 160 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 ANKRD36BQ8N2N9 1353 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 ARMC9Q7Z3E5 817 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 RASEFQ8IZ41 740 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 FRMD3A2A2Y4 597 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 CHMP4BP1P59074 171 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 CAMK4Q16566 473 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 PHACTR2O75167 634 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 SPECC1Q5M775 1068 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 C17orf53Q8N3J3 647 aaPredicted RBP8.99□□□□□ -0.97
RSF1-201ENST00000308488 RRBP1Q9P2E9 1410 aaKnown RBP8.99□□□□□ -0.97
RSF1-201ENST00000308488 ZBTB22O15209 634 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 PRPHP41219 470 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 TRIM7Q9C029 511 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 SCAPERQ9BY12 1400 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 MIER3Q7Z3K6 550 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 ZSWIM4Q9H7M6 989 aa8.99□□□□□ -0.97
RSF1-201ENST00000308488 MORC2Q9Y6X9 1032 aaPredicted RBP8.99□□□□□ -0.97
RSF1-201ENST00000308488 PHLDB2Q86SQ0 1253 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 RUNDC1Q96C34 613 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 RRP7AQ9Y3A4 280 aaKnown RBP8.98□□□□□ -0.97
RSF1-201ENST00000308488 ABCC8Q09428 1581 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 ZEB2O60315 1214 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 VAV2P52735 878 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 KIAA1524Q8TCG1 905 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 GIGYF1O75420 1035 aaPredicted RBP8.98□□□□□ -0.97
RSF1-201ENST00000308488 AMOTQ4VCS5 1084 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 CDK5RAP3Q96JB5 506 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 SPA17Q15506 151 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 NFXL1Q6ZNB6 911 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 PNMA8AQ86V59 439 aaPredicted RBP8.98□□□□□ -0.97
RSF1-201ENST00000308488 HIP1O00291 1037 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 PSMC4P43686 418 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 INF2Q27J81 1249 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 SDCCAG8Q86SQ7 713 aaPredicted RBP8.98□□□□□ -0.97
RSF1-201ENST00000308488 TSPYL2Q9H2G4 693 aaPredicted RBP8.98□□□□□ -0.97
RSF1-201ENST00000308488 CYP46A1Q9Y6A2 500 aa8.98□□□□□ -0.97
RSF1-201ENST00000308488 PEG3Q9GZU2 1588 aa8.97□□□□□ -0.97
RSF1-201ENST00000308488 HSP90AB4PQ58FF6 505 aa8.97□□□□□ -0.97
RSF1-201ENST00000308488 RNF216Q9NWF9 866 aaPredicted RBP8.97□□□□□ -0.97
RSF1-201ENST00000308488 CCDC152Q4G0S7 254 aa8.97□□□□□ -0.97
RSF1-201ENST00000308488 CCDC158Q5M9N0 1113 aa8.97□□□□□ -0.97
RSF1-201ENST00000308488 JAKMIP1Q96N16 626 aaKnown RBP8.97□□□□□ -0.97
RSF1-201ENST00000308488 FAM114A2Q9NRY5 505 aa8.97□□□□□ -0.97
RSF1-201ENST00000308488 GOLGA6BA6NDN3 693 aa8.97□□□□□ -0.97
RSF1-201ENST00000308488 FBXO18Q8NFZ0 1043 aa8.97□□□□□ -0.97
RSF1-201ENST00000308488 CCHCR1Q8TD31 782 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms