RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 NBPF14Q5TI25 921 aa26.06■■□□□ 1.76
YBX3-202ENST00000279550 NBPF10Q6P3W6 841 aaKnown RBP26.06■■□□□ 1.76
YBX3-202ENST00000279550 POTEAQ6S8J7 498 aa26.06■■□□□ 1.76
YBX3-202ENST00000279550 FAM196AQ6ZSG2 479 aa26.06■■□□□ 1.76
YBX3-202ENST00000279550 C16orf71Q8IYS4 520 aaPredicted RBP26.06■■□□□ 1.76
YBX3-202ENST00000279550 NBPF15Q8N660 670 aa26.06■■□□□ 1.76
YBX3-202ENST00000279550 SRCIN1Q9C0H9 1055 aa26.06■■□□□ 1.76
YBX3-202ENST00000279550 LRRFIP2Q9Y608 721 aaKnown RBP26.06■■□□□ 1.76
YBX3-202ENST00000279550 SBF2Q86WG5 1849 aa26.06■■□□□ 1.76
YBX3-202ENST00000279550 SMARCA5O60264 1052 aaPredicted RBP26.05■■□□□ 1.76
YBX3-202ENST00000279550 HMMRO75330 724 aa26.05■■□□□ 1.76
YBX3-202ENST00000279550 BMP2KLQ5H9B9 411 aa26.05■■□□□ 1.76
YBX3-202ENST00000279550 BEND3Q5T5X7 828 aa26.05■■□□□ 1.76
YBX3-202ENST00000279550 TJP1Q07157 1748 aa26.05■■□□□ 1.76
YBX3-202ENST00000279550 AIMP1Q12904 312 aaKnown RBP26.05■■□□□ 1.76
YBX3-202ENST00000279550 PLEKHM2Q8IWE5 1019 aa26.05■■□□□ 1.76
YBX3-202ENST00000279550 BTAF1O14981 1849 aa26.05■■□□□ 1.76
YBX3-202ENST00000279550 APBB1O00213 710 aa26.04■■□□□ 1.76
YBX3-202ENST00000279550 DDX58O95786 925 aaKnown RBP26.04■■□□□ 1.76
YBX3-202ENST00000279550 CYP19A1P11511 503 aaPredicted RBP26.04■■□□□ 1.76
YBX3-202ENST00000279550 COPS6Q7L5N1 327 aa26.04■■□□□ 1.76
YBX3-202ENST00000279550 OTUD7AQ8TE49 926 aaPredicted RBP26.04■■□□□ 1.76
YBX3-202ENST00000279550 XAGE3Q8WTP9 111 aa26.04■■□□□ 1.76
YBX3-202ENST00000279550 PNMA6EA0A0J9YXQ4 647 aa26.03■■□□□ 1.76
YBX3-202ENST00000279550 ATP6V1AP38606 617 aa26.03■■□□□ 1.76
YBX3-202ENST00000279550 ATP8B2P98198 1209 aa26.03■■□□□ 1.76
YBX3-202ENST00000279550 KSR2Q6VAB6 950 aa26.02■■□□□ 1.76
YBX3-202ENST00000279550 TBC1D32Q96NH3 1257 aa26.02■■□□□ 1.76
YBX3-202ENST00000279550 BCL11BQ9C0K0 894 aaPredicted RBP26.02■■□□□ 1.76
YBX3-202ENST00000279550 CICQ96RK0 1608 aaPredicted RBP26.02■■□□□ 1.76
YBX3-202ENST00000279550 UBTFL1P0CB47 393 aaPredicted RBP26.02■■□□□ 1.76
YBX3-202ENST00000279550 SLC4A3P48751 1232 aa26.02■■□□□ 1.76
YBX3-202ENST00000279550 BCL11AQ9H165 835 aa26.01■■□□□ 1.75
YBX3-202ENST00000279550 MAP3K2Q9Y2U5 619 aa26.01■■□□□ 1.75
YBX3-202ENST00000279550 ZNF831Q5JPB2 1677 aa25.99■■□□□ 1.75
YBX3-202ENST00000279550 GSPT1P15170 499 aaKnown RBP25.99■■□□□ 1.75
YBX3-202ENST00000279550 MFAP1P55081 439 aaKnown RBP25.99■■□□□ 1.75
YBX3-202ENST00000279550 ITPK1Q13572 414 aa25.99■■□□□ 1.75
YBX3-202ENST00000279550 UPF2Q9HAU5 1272 aaKnown RBP25.99■■□□□ 1.75
YBX3-202ENST00000279550 ANKRD13DQ6ZTN6 518 aa25.98■■□□□ 1.75
YBX3-202ENST00000279550 EXOC6BQ9Y2D4 811 aa25.98■■□□□ 1.75
YBX3-202ENST00000279550 NBPF7P0C2Y1 421 aaPredicted RBP25.97■■□□□ 1.75
YBX3-202ENST00000279550 RIC3Q7Z5B4 369 aa25.97■■□□□ 1.75
YBX3-202ENST00000279550 ZBTB1Q9Y2K1 713 aa25.97■■□□□ 1.75
YBX3-202ENST00000279550 TTC22Q5TAA0 569 aa25.96■■□□□ 1.75
YBX3-202ENST00000279550 TRIM37O94972 964 aa25.94■■□□□ 1.74
YBX3-202ENST00000279550 CRKLP46109 303 aaKnown RBP25.94■■□□□ 1.74
YBX3-202ENST00000279550 TTLL7Q6ZT98 887 aa25.94■■□□□ 1.74
YBX3-202ENST00000279550 PLBD2Q8NHP8 589 aa25.94■■□□□ 1.74
YBX3-202ENST00000279550 SSH3Q8TE77 659 aa25.94■■□□□ 1.74
YBX3-202ENST00000279550 CCDC87Q9NVE4 849 aa25.94■■□□□ 1.74
YBX3-202ENST00000279550 ZNF330Q9Y3S2 320 aaPredicted RBP25.94■■□□□ 1.74
YBX3-202ENST00000279550 IBTKQ9P2D0 1353 aaPredicted RBP25.93■■□□□ 1.74
YBX3-202ENST00000279550 ALDH1L1O75891 902 aa25.93■■□□□ 1.74
YBX3-202ENST00000279550 INTS5Q6P9B9 1019 aaKnown RBP25.93■■□□□ 1.74
YBX3-202ENST00000279550 COL5A3P25940 1745 aaPredicted RBP25.92■■□□□ 1.74
YBX3-202ENST00000279550 POLA2Q14181 598 aa25.92■■□□□ 1.74
YBX3-202ENST00000279550 TBC1D9Q6ZT07 1266 aa25.92■■□□□ 1.74
YBX3-202ENST00000279550 METTL22Q9BUU2 404 aaPredicted RBP25.92■■□□□ 1.74
YBX3-202ENST00000279550 LY75O60449 1722 aa25.92■■□□□ 1.74
YBX3-202ENST00000279550 IL6STP40189 918 aaPredicted RBP25.91■■□□□ 1.74
YBX3-202ENST00000279550 KCNQ4P56696 695 aa25.91■■□□□ 1.74
YBX3-202ENST00000279550 CWF19L2Q2TBE0 894 aaKnown RBP25.91■■□□□ 1.74
YBX3-202ENST00000279550 PPP1R42Q7Z4L9 355 aa25.91■■□□□ 1.74
YBX3-202ENST00000279550 LINS1Q8NG48 757 aa25.91■■□□□ 1.74
YBX3-202ENST00000279550 C22orf23Q9BZE7 217 aa25.91■■□□□ 1.74
YBX3-202ENST00000279550 RREB1Q92766 1687 aa25.91■■□□□ 1.74
YBX3-202ENST00000279550 LINC00116Q8NCU8 138 aa25.91■■□□□ 1.74
YBX3-202ENST00000279550 CCNL1Q9UK58 526 aaPredicted RBP25.91■■□□□ 1.74
YBX3-202ENST00000279550 NEXNQ0ZGT2 675 aa25.9■■□□□ 1.74
YBX3-202ENST00000279550 ARFGEF2Q9Y6D5 1785 aa25.9■■□□□ 1.74
YBX3-202ENST00000279550 ILDR1Q86SU0 546 aaPredicted RBP25.89■■□□□ 1.74
YBX3-202ENST00000279550 MYD88Q99836 296 aa25.88■■□□□ 1.73
YBX3-202ENST00000279550 LRRCC1Q9C099 1032 aa25.88■■□□□ 1.73
YBX3-202ENST00000279550 SALL3Q9BXA9 1300 aa25.88■■□□□ 1.73
YBX3-202ENST00000279550 CDC45O75419 566 aa25.88■■□□□ 1.73
YBX3-202ENST00000279550 IGKV5-2P06315 115 aa25.88■■□□□ 1.73
YBX3-202ENST00000279550 ZBTB3Q9H5J0 574 aa25.88■■□□□ 1.73
YBX3-202ENST00000279550 NUP188Q5SRE5 1749 aa25.87■■□□□ 1.73
YBX3-202ENST00000279550 EIF5P55010 431 aaKnown RBP25.87■■□□□ 1.73
YBX3-202ENST00000279550 KIF6Q6ZMV9 814 aa25.87■■□□□ 1.73
YBX3-202ENST00000279550 MYH14Q7Z406 1995 aaKnown RBP25.87■■□□□ 1.73
YBX3-202ENST00000279550 DAXXQ9UER7 740 aaPredicted RBP25.86■■□□□ 1.73
YBX3-202ENST00000279550 CNTNAP4Q9C0A0 1308 aa25.86■■□□□ 1.73
YBX3-202ENST00000279550 NEURL1BA8MQ27 555 aa25.85■■□□□ 1.73
YBX3-202ENST00000279550 SRGAP3O43295 1099 aa25.85■■□□□ 1.73
YBX3-202ENST00000279550 PDE1AP54750 535 aa25.85■■□□□ 1.73
YBX3-202ENST00000279550 C9orf78Q9NZ63 289 aaPredicted RBP25.85■■□□□ 1.73
YBX3-202ENST00000279550 OSBPL3Q9H4L5 887 aa25.85■■□□□ 1.73
YBX3-202ENST00000279550 MAP3K15Q6ZN16 1313 aa25.85■■□□□ 1.73
YBX3-202ENST00000279550 SDSP20132 328 aa25.84■■□□□ 1.73
YBX3-202ENST00000279550 ARXQ96QS3 562 aa25.84■■□□□ 1.73
YBX3-202ENST00000279550 RC3H1Q5TC82 1133 aaKnown RBP25.83■■□□□ 1.73
YBX3-202ENST00000279550 UTYO14607 1347 aa25.83■■□□□ 1.73
YBX3-202ENST00000279550 SURF6O75683 361 aaKnown RBP25.83■■□□□ 1.72
YBX3-202ENST00000279550 MTX1Q13505 466 aa25.83■■□□□ 1.72
YBX3-202ENST00000279550 TSHZ3Q63HK5 1081 aa25.83■■□□□ 1.72
YBX3-202ENST00000279550 DZIP3Q86Y13 1208 aaKnown RBP25.83■■□□□ 1.72
YBX3-202ENST00000279550 ATP5J2-PTCD1G3V325 749 aa25.82■■□□□ 1.72
YBX3-202ENST00000279550 GRM8O00222 908 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms