RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 SLC4A9Q96Q91 983 aa22.33■■□□□ 1.17
KLHDC3-201ENST00000244670 AFDNP55196 1824 aaKnown RBP22.33■■□□□ 1.17
KLHDC3-201ENST00000244670 NOP58Q9Y2X3 529 aaKnown RBP22.33■■□□□ 1.16
KLHDC3-201ENST00000244670 ZNF330Q9Y3S2 320 aaPredicted RBP22.33■■□□□ 1.16
KLHDC3-201ENST00000244670 EXOC6BQ9Y2D4 811 aa22.32■■□□□ 1.16
KLHDC3-201ENST00000244670 AFF2P51816 1311 aa22.32■■□□□ 1.16
KLHDC3-201ENST00000244670 NEURL1BA8MQ27 555 aa22.31■■□□□ 1.16
KLHDC3-201ENST00000244670 SMARCA5O60264 1052 aaPredicted RBP22.31■■□□□ 1.16
KLHDC3-201ENST00000244670 TEX13AQ9BXU3 409 aaPredicted RBP22.31■■□□□ 1.16
KLHDC3-201ENST00000244670 SEC24BO95487 1268 aa22.31■■□□□ 1.16
KLHDC3-201ENST00000244670 PPP1R42Q7Z4L9 355 aa22.31■■□□□ 1.16
KLHDC3-201ENST00000244670 PLBD2Q8NHP8 589 aa22.31■■□□□ 1.16
KLHDC3-201ENST00000244670 ZBTB47Q9UFB7 747 aaPredicted RBP22.31■■□□□ 1.16
KLHDC3-201ENST00000244670 NUP188Q5SRE5 1749 aa22.3■■□□□ 1.16
KLHDC3-201ENST00000244670 GRM8O00222 908 aa22.3■■□□□ 1.16
KLHDC3-201ENST00000244670 ATP5J2-PTCD1G3V325 749 aa22.29■■□□□ 1.16
KLHDC3-201ENST00000244670 STARD3NLO95772 234 aa22.29■■□□□ 1.16
KLHDC3-201ENST00000244670 TJP1Q07157 1748 aa22.29■■□□□ 1.16
KLHDC3-201ENST00000244670 KCNQ2O43526 872 aa22.29■■□□□ 1.16
KLHDC3-201ENST00000244670 ZBTB3Q9H5J0 574 aa22.29■■□□□ 1.16
KLHDC3-201ENST00000244670 SRGAP3O43295 1099 aa22.28■■□□□ 1.16
KLHDC3-201ENST00000244670 GCKRQ14397 625 aa22.28■■□□□ 1.16
KLHDC3-201ENST00000244670 C16orf71Q8IYS4 520 aaPredicted RBP22.28■■□□□ 1.16
KLHDC3-201ENST00000244670 SSH3Q8TE77 659 aa22.27■■□□□ 1.16
KLHDC3-201ENST00000244670 SUCLG2Q96I99 432 aa22.27■■□□□ 1.16
KLHDC3-201ENST00000244670 THSD7AQ9UPZ6 1657 aa22.27■■□□□ 1.16
KLHDC3-201ENST00000244670 UTYO14607 1347 aa22.26■■□□□ 1.15
KLHDC3-201ENST00000244670 CYP19A1P11511 503 aaPredicted RBP22.26■■□□□ 1.15
KLHDC3-201ENST00000244670 JARID2Q92833 1246 aaPredicted RBP22.26■■□□□ 1.15
KLHDC3-201ENST00000244670 GJD4Q96KN9 370 aaPredicted RBP22.26■■□□□ 1.15
KLHDC3-201ENST00000244670 POLA2Q14181 598 aa22.25■■□□□ 1.15
KLHDC3-201ENST00000244670 OTUD7AQ8TE49 926 aaPredicted RBP22.25■■□□□ 1.15
KLHDC3-201ENST00000244670 FAM182BQ5T319 152 aa22.24■■□□□ 1.15
KLHDC3-201ENST00000244670 KAZALD1Q96I82 304 aa22.24■■□□□ 1.15
KLHDC3-201ENST00000244670 ARXQ96QS3 562 aa22.24■■□□□ 1.15
KLHDC3-201ENST00000244670 PLEKHM2Q8IWE5 1019 aa22.23■■□□□ 1.15
KLHDC3-201ENST00000244670 BICC1Q9H694 974 aaKnown RBP22.23■■□□□ 1.15
KLHDC3-201ENST00000244670 ZBTB1Q9Y2K1 713 aa22.23■■□□□ 1.15
KLHDC3-201ENST00000244670 IBTKQ9P2D0 1353 aaPredicted RBP22.23■■□□□ 1.15
KLHDC3-201ENST00000244670 HDAC5Q9UQL6 1122 aa22.23■■□□□ 1.15
KLHDC3-201ENST00000244670 PALLDQ8WX93 1383 aa22.23■■□□□ 1.15
KLHDC3-201ENST00000244670 SURF6O75683 361 aaKnown RBP22.22■■□□□ 1.15
KLHDC3-201ENST00000244670 ATP6V1AP38606 617 aa22.22■■□□□ 1.15
KLHDC3-201ENST00000244670 LRRCC1Q9C099 1032 aa22.22■■□□□ 1.15
KLHDC3-201ENST00000244670 ATRNO75882 1429 aa22.22■■□□□ 1.15
KLHDC3-201ENST00000244670 UBE3BQ7Z3V4 1068 aa22.21■■□□□ 1.15
KLHDC3-201ENST00000244670 A0A087WZG4 1122 aa22.21■■□□□ 1.15
KLHDC3-201ENST00000244670 LOC102724428A0A0B4J2F2 783 aa22.21■■□□□ 1.15
KLHDC3-201ENST00000244670 SIK1P57059 783 aa22.21■■□□□ 1.15
KLHDC3-201ENST00000244670 MTX1Q13505 466 aa22.21■■□□□ 1.15
KLHDC3-201ENST00000244670 KIF6Q6ZMV9 814 aa22.21■■□□□ 1.15
KLHDC3-201ENST00000244670 TRPC5Q9UL62 973 aaPredicted RBP22.21■■□□□ 1.15
KLHDC3-201ENST00000244670 PTF1AQ7RTS3 328 aa22.2■■□□□ 1.14
KLHDC3-201ENST00000244670 EPHA10Q5JZY3 1008 aa22.19■■□□□ 1.14
KLHDC3-201ENST00000244670 ITPK1Q13572 414 aa22.18■■□□□ 1.14
KLHDC3-201ENST00000244670 BMP2KLQ5H9B9 411 aa22.18■■□□□ 1.14
KLHDC3-201ENST00000244670 RTL5Q5HYW3 569 aaPredicted RBP22.18■■□□□ 1.14
KLHDC3-201ENST00000244670 DDRGK1Q96HY6 314 aa22.18■■□□□ 1.14
KLHDC3-201ENST00000244670 CWC25Q9NXE8 425 aaPredicted RBP22.18■■□□□ 1.14
KLHDC3-201ENST00000244670 PA2G4Q9UQ80 394 aaKnown RBP22.18■■□□□ 1.14
KLHDC3-201ENST00000244670 IL1RAPL2Q9NP60 686 aa22.18■■□□□ 1.14
KLHDC3-201ENST00000244670 SMARCC1Q92922 1105 aaPredicted RBP22.17■■□□□ 1.14
KLHDC3-201ENST00000244670 QTRT2Q9H974 415 aaKnown RBP22.17■■□□□ 1.14
KLHDC3-201ENST00000244670 GSPT1P15170 499 aaKnown RBP22.16■■□□□ 1.14
KLHDC3-201ENST00000244670 MAP3K15Q6ZN16 1313 aa22.16■■□□□ 1.14
KLHDC3-201ENST00000244670 CRKLP46109 303 aaKnown RBP22.16■■□□□ 1.14
KLHDC3-201ENST00000244670 CASP7P55210 303 aa22.16■■□□□ 1.14
KLHDC3-201ENST00000244670 OS9Q13438 667 aaPredicted RBP22.16■■□□□ 1.14
KLHDC3-201ENST00000244670 SEPT12Q8IYM1 358 aa22.16■■□□□ 1.14
KLHDC3-201ENST00000244670 BTAF1O14981 1849 aa22.15■■□□□ 1.14
KLHDC3-201ENST00000244670 MYH14Q7Z406 1995 aaKnown RBP22.15■■□□□ 1.14
KLHDC3-201ENST00000244670 RAB11FIP3O75154 756 aa22.15■■□□□ 1.14
KLHDC3-201ENST00000244670 TCIRG1Q13488 830 aa22.15■■□□□ 1.14
KLHDC3-201ENST00000244670 HLFQ16534 295 aa22.15■■□□□ 1.14
KLHDC3-201ENST00000244670 TTC22Q5TAA0 569 aa22.15■■□□□ 1.14
KLHDC3-201ENST00000244670 CCDC191Q8NCU4 936 aa22.15■■□□□ 1.14
KLHDC3-201ENST00000244670 RHPN1Q8TCX5 695 aa22.15■■□□□ 1.14
KLHDC3-201ENST00000244670 CCDC87Q9NVE4 849 aa22.15■■□□□ 1.14
KLHDC3-201ENST00000244670 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.14
KLHDC3-201ENST00000244670 INTS5Q6P9B9 1019 aaKnown RBP22.14■■□□□ 1.14
KLHDC3-201ENST00000244670 ISCA1Q9BUE6 129 aa22.14■■□□□ 1.14
KLHDC3-201ENST00000244670 TBC1D2BQ9UPU7 963 aa22.14■■□□□ 1.14
KLHDC3-201ENST00000244670 NHSQ6T4R5 1651 aa22.14■■□□□ 1.13
KLHDC3-201ENST00000244670 H7C1W4 665 aa22.14■■□□□ 1.13
KLHDC3-201ENST00000244670 TSHZ3Q63HK5 1081 aa22.14■■□□□ 1.13
KLHDC3-201ENST00000244670 CICQ96RK0 1608 aaPredicted RBP22.13■■□□□ 1.13
KLHDC3-201ENST00000244670 KCNQ4P56696 695 aa22.13■■□□□ 1.13
KLHDC3-201ENST00000244670 KLHDC4Q8TBB5 520 aa22.13■■□□□ 1.13
KLHDC3-201ENST00000244670 TBC1D32Q96NH3 1257 aa22.13■■□□□ 1.13
KLHDC3-201ENST00000244670 ONECUT3O60422 494 aaPredicted RBP22.12■■□□□ 1.13
KLHDC3-201ENST00000244670 PDE1AP54750 535 aa22.12■■□□□ 1.13
KLHDC3-201ENST00000244670 GIGYF2Q6Y7W6 1299 aaKnown RBP22.12■■□□□ 1.13
KLHDC3-201ENST00000244670 DZIP3Q86Y13 1208 aaKnown RBP22.12■■□□□ 1.13
KLHDC3-201ENST00000244670 KIF1BPQ96EK5 621 aa22.12■■□□□ 1.13
KLHDC3-201ENST00000244670 NUP98P52948 1817 aa22.12■■□□□ 1.13
KLHDC3-201ENST00000244670 COL5A3P25940 1745 aaPredicted RBP22.12■■□□□ 1.13
KLHDC3-201ENST00000244670 HSP90AB4PQ58FF6 505 aa22.12■■□□□ 1.13
KLHDC3-201ENST00000244670 UPF2Q9HAU5 1272 aaKnown RBP22.12■■□□□ 1.13
KLHDC3-201ENST00000244670 SALL3Q9BXA9 1300 aa22.11■■□□□ 1.13
KLHDC3-201ENST00000244670 GPTP24298 496 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms