RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 RPS17P08708 135 aaKnown RBP17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 PIK3R1P27986 724 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 SERPINB3P29508 390 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 HERVK_113P63132 956 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 ERVK-8P63133 956 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 TRAF3Q13114 568 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 ZNF267Q14586 743 aaPredicted RBP17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 CD163Q86VB7 1156 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 IFT20Q8IY31 132 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 FAM109AQ8N4B1 249 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 SPACA9Q96E40 222 aaPredicted RBP17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 ERVK-6Q9BXR3 956 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 DEFB127Q9H1M4 99 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 BRF2Q9HAW0 419 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 CNIH4Q9P003 139 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 SNX6Q9UNH7 406 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 ERVK-19Q9WJR5 959 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 PHF3Q92576 2039 aaKnown RBP17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 NINQ8N4C6 2090 aa17.62■□□□□ 0.41
CCDC28A-203ENST00000617445 GLOD5A6NK44 160 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 ZNHIT1O43257 154 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 ZNF354AO60765 605 aaPredicted RBP17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 PDE9AO76083 593 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 IGHG3P01860 377 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 PRF1P14222 555 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 SLC37A1P57057 533 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 FOXO1Q12778 655 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 DGAT2L6Q6ZPD8 337 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 GDF7Q7Z4P5 450 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 TAGAPQ8N103 731 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 METTL4Q8N3J2 472 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 OR4F6Q8NGB9 312 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 OR4K14Q8NGD5 310 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 PAQR8Q8TEZ7 354 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 CA5BP1Q8WTZ4 195 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 NSUN5Q96P11 429 aaKnown RBP17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 SH2D2AQ9NP31 389 aa17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 SEMA4BQ9NPR2 832 aaPredicted RBP17.61■□□□□ 0.41
CCDC28A-203ENST00000617445 A0A1B0GVC2 190 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 FAM166BA8MTA8 275 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 CAPN14A8MX76 684 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 HRKO00198 91 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 BCKDKO14874 412 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 SUSD5O60279 629 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 PRKRAO75569 313 aaKnown RBP17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 NADKO95544 446 aaPredicted RBP17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 KLK1P06870 262 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 FBXO45P0C2W1 286 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 CCL3P10147 92 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 TAC1P20366 129 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 TNFRSF8P28908 595 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 SLC10A1Q14973 349 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 CCNYL2Q5T2Q4 361 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 ADGRD1Q6QNK2 874 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 C3P1Q6ZMU1 363 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 TMEM151AQ8N4L1 468 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 TMEM251Q8N6I4 163 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 UHMK1Q8TAS1 419 aaKnown RBP17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 ZNF483Q8TF39 744 aaPredicted RBP17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 ASB5Q8WWX0 329 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 SREK1Q8WXA9 508 aaKnown RBP17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 TP53INP1Q96A56 240 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 SDCCAG3Q96C92 435 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 WWTR1Q9GZV5 400 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 CXorf21Q9HAI6 301 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 NFU1Q9UMS0 254 aa17.6■□□□□ 0.41
CCDC28A-203ENST00000617445 A0A0G2JMM0 328 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 A0A1W2PPB8 328 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 A0A1W2PRS3 328 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 WASHC1A8K0Z3 465 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 A8MT66 165 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 KIR3DP1A8MWS1 328 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 PGRMC2O15173 223 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 GBAP04062 536 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 MAPK12P53778 367 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 FUT7Q11130 342 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 EBPQ15125 230 aaKnown RBP17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 C6orf163Q5TEZ5 329 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 LYPD8Q6UX82 237 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 ACAD11Q709F0 780 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 TRILQ7L0X0 811 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 FBXW8Q8N3Y1 598 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 RND1Q92730 232 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 SPOCK3Q9BQ16 436 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 FETUBQ9UGM5 382 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 TRPS1Q9UHF7 1281 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 PSME2Q9UL46 239 aa17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 BOKQ9UMX3 212 aaPredicted RBP17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.59■□□□□ 0.41
CCDC28A-203ENST00000617445 C2orf92A0A1B0GVN3 265 aa17.58■□□□□ 0.4
CCDC28A-203ENST00000617445 C1orf226A1L170 272 aa17.58■□□□□ 0.4
CCDC28A-203ENST00000617445 G3V3Y1 287 aa17.58■□□□□ 0.4
CCDC28A-203ENST00000617445 AQP7O14520 342 aa17.58■□□□□ 0.4
CCDC28A-203ENST00000617445 HCN1O60741 890 aa17.58■□□□□ 0.4
CCDC28A-203ENST00000617445 SBK3P0C264 359 aa17.58■□□□□ 0.4
CCDC28A-203ENST00000617445 HSD3B1P14060 373 aa17.58■□□□□ 0.4
CCDC28A-203ENST00000617445 HSD3B2P26439 372 aa17.58■□□□□ 0.4
CCDC28A-203ENST00000617445 DNASE1L1P49184 302 aa17.58■□□□□ 0.4
CCDC28A-203ENST00000617445 XKP51811 444 aa17.58■□□□□ 0.4
CCDC28A-203ENST00000617445 NTRK2Q16620 822 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms