RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 WNK2Q9Y3S1 2297 aa4.68□□□□□ -1.66
SBDSP1-204ENST00000453858 DYNC1H1Q14204 4646 aaKnown RBP4.68□□□□□ -1.66
SBDSP1-204ENST00000453858 A0A0A6YYC8 382 aaPredicted RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 A0A1W2PNV4 684 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 A0A1W2PP18 115 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 LRRC3CA6NJW4 275 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 C2CD4BA6NLJ0 364 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 CCT8L1PA6NM43 557 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 CAPN14A8MX76 684 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 ISM1B1AKI9 464 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 DIRC3C9JPN6 131 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 I3L1I5 382 aaPredicted RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 DFFAO00273 331 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 CCP110O43303 1012 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 LY6HO94772 140 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 OR6B1O95007 311 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 AMY1AP04745 511 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 KRT5P13647 590 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 PTNP21246 168 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 ACADLP28330 430 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 USP8P40818 1118 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 BUD31P41223 144 aaPredicted RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 TRPC1P48995 793 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 DNASE1L1P49184 302 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 CDH15P55291 814 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 ACTN3Q08043 901 aaPredicted RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 NIPAL4Q0D2K0 466 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 SCGB2A2Q13296 93 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 GAB1Q13480 694 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 PTK6Q13882 451 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 ICAM4Q14773 271 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 NSDHLQ15738 373 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 CDO1Q16878 200 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 ZNF750Q32MQ0 723 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 BCL7AQ4VC05 210 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 LDLRAP1Q5SW96 308 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 DCST1Q5T197 706 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 Q6ZSN1 163 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 GPALPP1Q8IXQ4 340 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 GRAMD1CQ8IYS0 662 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 PM20D2Q8IYS1 436 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 LMNTD1Q8N9Z9 388 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 OR5AR1Q8NGP9 310 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 TFGQ92734 400 aaPredicted RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 RGMAQ96B86 450 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 TMX3Q96JJ7 454 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 ADAD1Q96M93 576 aaKnown RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 TTC25Q96NG3 672 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 MRI1Q9BV20 369 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 NTMT1Q9BV86 223 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 GATA5Q9BWX5 397 aaPredicted RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 CACNG6Q9BXT2 260 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 C11orf54Q9H0W9 315 aaPredicted RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 EXO5Q9H790 373 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 ARNT2Q9HBZ2 717 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 PCDH9Q9HC56 1237 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 ADAP2Q9NPF8 381 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 ZNF223Q9UK11 482 aaPredicted RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 FZD10Q9ULW2 581 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 RUVBL1Q9Y265 456 aaKnown RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 YARS2Q9Y2Z4 477 aaKnown RBP4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 ATG4BQ9Y4P1 393 aa4.67□□□□□ -1.66
SBDSP1-204ENST00000453858 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 LRP5LA4QPB2 252 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 MAGEB17A8MXT2 336 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 CXorf49A8MYA2 514 aaPredicted RBP4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 H0YGG7 62 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 GOLGA8MH3BSY2 632 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 CCDC188H7C350 402 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 K7EIL1 84 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 NDUFS8O00217 210 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 TIMM23O14925 209 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 PRPF4O43172 522 aaKnown RBP eCLIP4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 PRKNO60260 465 aaPredicted RBP4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 B4GALT2O60909 372 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 MMP2P08253 660 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 CSF3P09919 207 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 RAP2AP10114 183 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 POU2F1P14859 743 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 TBXA2RP21731 343 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 PRTN3P24158 256 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 MMP13P45452 471 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 FMO5P49326 533 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 GPR143P51810 404 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 EFNA4P52798 201 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 ARF3P61204 181 aaPredicted RBP4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 FAM53BQ14153 422 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 ABRAXAS2Q15018 415 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 HKDC1Q2TB90 917 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 SPATS1Q496A3 300 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 NCMAPQ5T1S8 102 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 LRRC8BQ6P9F7 803 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 IL20RBQ6UXL0 311 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 RNF44Q7L0R7 432 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 CDKL3Q8IVW4 592 aaPredicted RBP4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 WDR75Q8IWA0 830 aaKnown RBP4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 GCNT2Q8N0V5 402 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 LPCAT1Q8NF37 534 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 IL17RDQ8NFM7 739 aa4.66□□□□□ -1.66
SBDSP1-204ENST00000453858 FAM110DQ8TAY7 271 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms