RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 MRGPRX3Q96LB0 322 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 ZIC5Q96T25 663 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 PRMT1Q99873 361 aaKnown RBP4.74□□□□□ -1.65
EPHA3-202ENST00000452448 ATG101Q9BSB4 218 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 TMEM109Q9BVC6 243 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 ELOVL1Q9BW60 279 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 C1QTNF1Q9BXJ1 281 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 MS4A7Q9GZW8 240 aaPredicted RBP4.74□□□□□ -1.65
EPHA3-202ENST00000452448 ZNF576Q9H609 170 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 RPF1Q9H9Y2 349 aaKnown RBP4.74□□□□□ -1.65
EPHA3-202ENST00000452448 POLE4Q9NR33 117 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 IMP3Q9NV31 184 aaKnown RBP4.74□□□□□ -1.65
EPHA3-202ENST00000452448 C14orf105Q9NVL8 296 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 PTGFRNQ9P2B2 879 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 ARPP21Q9UBL0 812 aaPredicted RBP4.74□□□□□ -1.65
EPHA3-202ENST00000452448 ZNF70Q9UC06 446 aaPredicted RBP4.74□□□□□ -1.65
EPHA3-202ENST00000452448 ZDHHC2Q9UIJ5 367 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 DKKL1Q9UK85 242 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 PLA2G4CQ9UP65 541 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 ZNF451Q9Y4E5 1061 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 AP4S1Q9Y587 144 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 TNFRSF18Q9Y5U5 241 aa4.74□□□□□ -1.65
EPHA3-202ENST00000452448 TNS2Q63HR2 1409 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 TCRBV21S2A2A0A5A6 115 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 TRBC2A0A5B9 178 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 NEMP2A6NFY4 417 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 MROH6A6NGR9 719 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CD8B2A6NJW9 211 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 H3BMQ9 156 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 KLRC4-KLRK1H3BQV0 150 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PIK3R2O00459 728 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 BTN3A3O00478 584 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 RNF13O43567 381 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 LRCH4O75427 683 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 AKAP3O75969 853 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 B3GAT3O94766 335 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 LRIG2O94898 1065 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PTTG1O95997 202 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 IGF2P01344 180 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 MPOP05164 745 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 NBEAP1P0C6P0 100 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ITGAMP11215 1152 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 LAMP2P13473 410 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 NID1P14543 1247 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ZNF30P17039 623 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ANXA7P20073 488 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 DDTP30046 118 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 OPRL1P41146 370 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 KCNK10P57789 538 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ERVS71-1P61550 626 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CSNK1G2P78368 415 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 IFITM3Q01628 133 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 OGDHQ02218 1023 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 IRF8Q02556 426 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PTSQ03393 145 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 EPS8Q12929 822 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 SHBQ15464 509 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 MEP1AQ16819 746 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 TRIM60Q495X7 471 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 FGD3Q5JSP0 725 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 SPATA46Q5T0L3 261 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 C9orf64Q5T6V5 341 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 FAM151BQ6UXP7 276 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 KANSL1Q7Z3B3 1105 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 SYVN1Q86TM6 617 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 YRDCQ86U90 279 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 RAB43Q86YS6 212 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 RBM45Q8IUH3 476 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 STX19Q8N4C7 294 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 WDTC1Q8N5D0 677 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 FAM83FQ8NEG4 500 aaPredicted RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 SEMA6DQ8NFY4 1073 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 OR2D3Q8NGH3 330 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ERGIC1Q969X5 290 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 SLAMF9Q96A28 289 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 C1orf159Q96HA4 380 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ST6GAL2Q96JF0 529 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 DCAF5Q96JK2 942 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 RPL10LQ96L21 214 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 NECTIN4Q96NY8 510 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 GCNAQ96QF7 691 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CPNE1Q99829 537 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 OR52A5Q9H2C5 316 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 SLC6A13Q9NSD5 602 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 GFOD1Q9NXC2 390 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 UPB1Q9UBR1 384 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PEF1Q9UBV8 284 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PURGQ9UJV8 347 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 SNX12Q9UMY4 172 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 STUB1Q9UNE7 303 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 MYOCOSA0A1B0GUC4 107 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 A0A1B0GVM2 712 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 A0A1W2PNV4 684 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CLEC18AA5D8T8 446 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 OR52A4PA6NMU1 304 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CLCA1A8K7I4 914 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PAPSS1O43252 624 aaPredicted RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PSTPIP1O43586 416 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 KHDRBS3O75525 346 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CYP7B1O75881 506 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms