RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 IQCF2Q8IXL9 164 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 RNF113BQ8IZP6 322 aaKnown RBP3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 WDTC1Q8N5D0 677 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 ANKRD42Q8N9B4 389 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 CCDC112Q8NEF3 446 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 DENND6BQ8NEG7 585 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 OR6C4Q8NGE1 309 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 OR2A12Q8NGT7 310 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 BBS10Q8TAM1 723 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 TMEM255BQ8WV15 326 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 NAT6Q93015 286 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 TBC1D31Q96DN5 1066 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 ALG14Q96F25 216 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 MAELQ96JY0 434 aaKnown RBP3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 TBATAQ96M53 351 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 GDAP1L1Q96MZ0 367 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 DUX3Q96PT4 197 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 H2AFJQ9BTM1 129 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 CALN1Q9BXU9 219 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 CLSTN2Q9H4D0 955 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 ACP6Q9NPH0 428 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 ZNF71Q9NQZ8 489 aaPredicted RBP3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 ARGLU1Q9NWB6 273 aaPredicted RBP3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 SARDHQ9UL12 918 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 PADI1Q9ULC6 663 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 A4GNTQ9UNA3 340 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 CSNK1G3Q9Y6M4 447 aa3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 PRRC2AP48634 2157 aaKnown RBP3.95□□□□□ -1.78
GTF3C3-207ENST00000451088 SCN8AQ9UQD0 1980 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 A0A0D9SEW6 157 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 TEX13CA0A0J9YWL9 993 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 SPTY2D1-AS1A0A0U1RR47 76 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 A0A1W2PQM1 296 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 GOLGA8SH3BPF8 625 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 ZW10O43264 779 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 SEC14L5O43304 696 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 SNAP91O60641 907 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 E2F6O75461 281 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 TNFSF15O95150 251 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 FTCDO95954 541 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 IGSF6O95976 241 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 GSRP00390 522 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 CSF2P04141 144 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 PLEKP08567 350 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 HOXB5P09067 269 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 ALPIP09923 528 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 CCDC175P0C221 793 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 KRT3P12035 628 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 H2AFXP16104 143 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 PRLRP16471 622 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 UQCRFS1P47985 274 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 CCNHP51946 323 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 MNAT1P51948 309 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 THOP1P52888 689 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 YBEYP58557 167 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 TAS2R38P59533 333 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 POLR2LP62875 67 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 CDR2Q01850 454 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 PEX6Q13608 980 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 ISXQ2M1V0 245 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 PRICKLE4Q2TBC4 344 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 PARP15Q460N3 678 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 ALFQ53S48 1182 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 GGNBP1Q5YKI7 109 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 DNAJC24Q6P3W2 148 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 BRAT1Q6PJG6 821 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 LINGO4Q6UY18 593 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 QSOX2Q6ZRP7 698 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 Q6ZSR6 202 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 CCDC80Q76M96 950 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 ABI3BPQ7Z7G0 1075 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 FAM131BQ86XD5 332 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 ZNF354CQ86Y25 554 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 APLFQ8IW19 511 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 RYBPQ8N488 228 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 ARL14Q8N4G2 192 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 METTL27Q8N6F8 245 aaPredicted RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 NEK11Q8NG66 645 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 OR2AP1Q8NGE2 309 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 MAPK15Q8TD08 544 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 HCAR2Q8TDS4 363 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 CXorf40AQ8TE69 158 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 HTR3CQ8WXA8 447 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 ARHGEF2Q92974 986 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 NTAN1Q96AB6 310 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 FBXO17Q96EF6 278 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 DTNBP1Q96EV8 351 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 ATXN7L3BQ96GX2 97 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 KLHL15Q96M94 604 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 IL12RB2Q99665 862 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 LRRC1Q9BTT6 524 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 FUCA2Q9BTY2 467 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 STRADBQ9C0K7 418 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 NAT10Q9H0A0 1025 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 ZDHHC6Q9H6R6 413 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 PPCSQ9HAB8 311 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 SIX2Q9NPC8 291 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 HINT3Q9NQE9 182 aaKnown RBP3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 HAUS2Q9NVX0 235 aa3.94□□□□□ -1.78
GTF3C3-207ENST00000451088 MPP6Q9NZW5 540 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms