RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 PAQR8Q8TEZ7 354 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 MTBPQ96DY7 904 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 NSUN5Q96P11 429 aaKnown RBP16.39■□□□□ 0.21
HDDC3-201ENST00000330334 DEFB127Q9H1M4 99 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 HRH3Q9Y5N1 445 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 FBN2P35556 2912 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 A0A0G2JMM0 328 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 A0A1W2PPB8 328 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 A0A1W2PRS3 328 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 GLOD5A6NK44 160 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 WASHC1A8K0Z3 465 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 KIR3DP1A8MWS1 328 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 SUSD5O60279 629 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 PDE9AO76083 593 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 SBK3P0C264 359 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 FBXO45P0C2W1 286 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 COX6B1P14854 86 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 TNFRSF8P28908 595 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 ARL1P40616 181 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-201ENST00000330334 HERVK_113P63132 956 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 ERVK-8P63133 956 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 ZNF267Q14586 743 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-201ENST00000330334 CDSNQ15517 529 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 TTC19Q6DKK2 380 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-201ENST00000330334 ADGRD1Q6QNK2 874 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 C3P1Q6ZMU1 363 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 RNF111Q6ZNA4 994 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 FAM47EQ6ZV65 393 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 TRMT10CQ7L0Y3 403 aaKnown RBP16.38■□□□□ 0.21
HDDC3-201ENST00000330334 METTL4Q8N3J2 472 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 FAM109AQ8N4B1 249 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 ACBD4Q8NC06 268 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 ZNF483Q8TF39 744 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-201ENST00000330334 TP53INP1Q96A56 240 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 SPACA9Q96E40 222 aaPredicted RBP16.38■□□□□ 0.21
HDDC3-201ENST00000330334 SPOCK3Q9BQ16 436 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 CNPPD1Q9BV87 410 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 ERVK-6Q9BXR3 956 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 ELOVL6Q9H5J4 265 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 CXorf21Q9HAI6 301 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 BRF2Q9HAW0 419 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 COQ3Q9NZJ6 369 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 CNIH4Q9P003 139 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 ERVK-19Q9WJR5 959 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 TACC2O95359 2948 aa16.38■□□□□ 0.21
HDDC3-201ENST00000330334 CSMD1Q96PZ7 3565 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 EXOC1LA0A1B0GW35 172 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 BCKDKO14874 412 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 PGRMC2O15173 223 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 GUCY1B2O75343 617 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 KLK1P06870 262 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 CCL3P10147 92 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 PIK3R1P27986 724 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 SERPINB3P29508 390 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 FUT7Q11130 342 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 SLC10A1Q14973 349 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 EBPQ15125 230 aaKnown RBP16.37■□□□□ 0.21
HDDC3-201ENST00000330334 EMC4Q5J8M3 183 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 TRILQ7L0X0 811 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 IFT20Q8IY31 132 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 TMEM251Q8N6I4 163 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 CEP112Q8N8E3 955 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 OR4F6Q8NGB9 312 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 OR4K14Q8NGD5 310 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 KIF18AQ8NI77 898 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 CA5BP1Q8WTZ4 195 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 WWTR1Q9GZV5 400 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 SEMA4BQ9NPR2 832 aaPredicted RBP16.37■□□□□ 0.21
HDDC3-201ENST00000330334 NMRK1Q9NWW6 199 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 FETUBQ9UGM5 382 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 SNX6Q9UNH7 406 aa16.37■□□□□ 0.21
HDDC3-201ENST00000330334 ZNF407Q9C0G0 2248 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 ANKRD33BA6NCL7 494 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 A8MT66 165 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 FAM166BA8MTA8 275 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 GBAP04062 536 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 CLPSP04118 112 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 GXYLT1Q4G148 440 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 CCNYL2Q5T2Q4 361 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 NCCRP1Q6ZVX7 275 aaPredicted RBP16.36■□□□□ 0.21
HDDC3-201ENST00000330334 GDF7Q7Z4P5 450 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 TAGAPQ8N103 731 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 MARVELD2Q8N4S9 558 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 ZNF441Q8N8Z8 693 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 C17orf47Q8NEP4 570 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 UHMK1Q8TAS1 419 aaKnown RBP16.36■□□□□ 0.21
HDDC3-201ENST00000330334 ASB5Q8WWX0 329 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 SREK1Q8WXA9 508 aaKnown RBP16.36■□□□□ 0.21
HDDC3-201ENST00000330334 UCN3Q969E3 161 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 SDCCAG3Q96C92 435 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 MRPL1Q9BYD6 325 aaKnown RBP16.36■□□□□ 0.21
HDDC3-201ENST00000330334 TEX10Q9NXF1 929 aaPredicted RBP16.36■□□□□ 0.21
HDDC3-201ENST00000330334 NFU1Q9UMS0 254 aa16.36■□□□□ 0.21
HDDC3-201ENST00000330334 CHCHD2Q9Y6H1 151 aaPredicted RBP16.36■□□□□ 0.21
HDDC3-201ENST00000330334 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.36■□□□□ 0.21
HDDC3-201ENST00000330334 CAPN14A8MX76 684 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 G3V3Y1 287 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 AQP7O14520 342 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 HCN1O60741 890 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 GCAP28676 217 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms