RNA–Protein interactions for RNA: ENST00000327359.7

BRF1-201, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-201ENST00000327359 P2RY13Q9BPV8 354 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.24■□□□□ 0.032e-6■■■■□ 19.6
BRF1-201ENST00000327359 NIPAL2Q9H841 368 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 DNAJC11Q9NVH1 559 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 GLTPQ9NZD2 209 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 RUVBL1Q9Y265 456 aaKnown RBP15.24■□□□□ 0.03
BRF1-201ENST00000327359 WNT6Q9Y6F9 365 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 NPIPB15A6NHN6 443 aaPredicted RBP15.24■□□□□ 0.03
BRF1-201ENST00000327359 ETHE1O95571 254 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 PDGFAP04085 211 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 CBSLP0DN79 551 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 IDSP22304 550 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 CBSP35520 551 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 MAP2K3P46734 347 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 HMGA2P52926 109 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 SNTA1Q13424 505 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 CDKL4Q5MAI5 379 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 LCN1P1Q5VSP4 162 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 C22orf39Q6P5X5 142 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 VRK3Q8IV63 474 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 CCDC120Q96HB5 630 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 TM9SF2Q99805 663 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 TRAF4Q9BUZ4 470 aaPredicted RBP15.24■□□□□ 0.03
BRF1-201ENST00000327359 SLC12A9Q9BXP2 914 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 HDHD5Q9BXW7 423 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 TEKT2Q9UIF3 430 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 SLC25A13Q9UJS0 675 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 HSPB11Q9Y547 144 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 DNMT3AQ9Y6K1 912 aaPredicted RBP15.24■□□□□ 0.03
BRF1-201ENST00000327359 CLCA3PQ9Y6N3 262 aa15.24■□□□□ 0.03
BRF1-201ENST00000327359 MTCL1Q9Y4B5 1905 aaKnown RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 ATP6V1G2-DDX39BF2Z307 99 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 SOX14O95416 240 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 IL1AP01583 271 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 ACADMP11310 421 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 TYRP14679 529 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 APEX1P27695 318 aaKnown RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 MAPK8P45983 427 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 CSNK1DP48730 415 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 MAN2A2P49641 1150 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 MLLT11Q13015 90 aaPredicted RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 CDKN3Q16667 212 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 ZNF385BQ569K4 471 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 LY6G5CQ5SRR4 150 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 GCNT6Q5T4J0 391 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 DDI2Q5TDH0 399 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 ZNF770Q6IQ21 691 aaPredicted RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 TMIGD1Q6UXZ0 262 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 Q6ZVU0 165 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 CHST14Q8NCH0 376 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 WDR20Q8TBZ3 569 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 GEMIN6Q8WXD5 167 aaKnown RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 SORCS1Q8WY21 1168 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 IRF7Q92985 503 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 C11orf24Q96F05 449 aaPredicted RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 TMEM121BQ9BXQ6 578 aaPredicted RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 SPATA6Q9NWH7 488 aaPredicted RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 ZNF282Q9UDV7 671 aaPredicted RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 ENOPH1Q9UHY7 261 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 MBD1Q9UIS9 605 aaPredicted RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 ACSL6Q9UKU0 697 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 AUP1Q9Y679 476 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 DSPPQ9NZW4 1301 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 LINC01553A4QN01 128 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 LRRTM2O43300 516 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 SOCS5O75159 536 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 LGI1O95970 557 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 HIST1H2AGP0C0S8 130 aaPredicted RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 ICAM2P13598 275 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 ZNF30P17039 623 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 HIST1H2ADP20671 130 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 SDC2P34741 201 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 PFN3P60673 137 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 HBA1P69905 142 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 ZNF91Q05481 1191 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 NCF4Q15080 339 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 LYPLAL1Q5VWZ2 237 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 MEDAGQ5VYS4 303 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 CRTC1Q6UUV9 634 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 RFLNAQ6ZTI6 216 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 AMIGO1Q86WK6 493 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 C1orf52Q8N6N3 182 aaKnown RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 CLDN22Q8N7P3 220 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 VPS37AQ8NEZ2 397 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 OR4K1Q8NGD4 311 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 SP7Q8TDD2 431 aaPredicted RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 ZBED6CLQ96FA7 236 aaPredicted RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 HIST1H2AHQ96KK5 128 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 NELL2Q99435 816 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 HIST1H2AJQ99878 128 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 H2AFJQ9BTM1 129 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 IL20Q9NYY1 176 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 SLC23A1Q9UHI7 598 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 ATPIF1Q9UII2 106 aa15.23■□□□□ 0.03
BRF1-201ENST00000327359 YARS2Q9Y2Z4 477 aaKnown RBP15.23■□□□□ 0.03
BRF1-201ENST00000327359 PDE9AO76083 593 aa15.22■□□□□ 0.03
BRF1-201ENST00000327359 RECKO95980 971 aa15.22■□□□□ 0.03
BRF1-201ENST00000327359 ANXA4P09525 319 aaPredicted RBP15.22■□□□□ 0.03
BRF1-201ENST00000327359 SNRPGP62308 76 aaKnown RBP15.22■□□□□ 0.03
BRF1-201ENST00000327359 B4GALNT1Q00973 533 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms