RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 VN1R4Q7Z5H5 301 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 PATL1Q86TB9 770 aaKnown RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 HIPK1Q86Z02 1210 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 OR8K5Q8NH50 307 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 C7orf34Q96L11 122 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 ZFYVE21Q9BQ24 234 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 ACSS1Q9NUB1 689 aaPredicted RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 SNX8Q9Y5X2 465 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 SLC9B1P1A6NJY1 282 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 hCG_2039718K7EN88 272 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 SUV39H1O43463 412 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 CD1CP29017 333 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 PRIM2P49643 509 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 SLAMF1Q13291 335 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 ELOAQ14241 798 aaKnown RBP21.35■■□□□ 1.01
CDX1-201ENST00000231656 SLC9A5Q14940 896 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 ZNF630Q2M218 657 aaPredicted RBP21.35■■□□□ 1.01
CDX1-201ENST00000231656 RNF44Q7L0R7 432 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 OFCC1Q8IZS5 231 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 ACOT4Q8N9L9 421 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 PRSS33Q8NF86 280 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 PSMA8Q8TAA3 256 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 ZBED6CLQ96FA7 236 aaPredicted RBP21.35■■□□□ 1.01
CDX1-201ENST00000231656 ZDHHC12Q96GR4 267 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 TPD52L3Q96J77 140 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 MBOAT4Q96T53 435 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 MYCBPQ99417 103 aaPredicted RBP21.35■■□□□ 1.01
CDX1-201ENST00000231656 DOHHQ9BU89 302 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 FAIM2Q9BWQ8 316 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 GABARAPL1Q9H0R8 117 aa21.35■■□□□ 1.01
CDX1-201ENST00000231656 IFT80Q9P2H3 777 aaPredicted RBP21.35■■□□□ 1.01
CDX1-201ENST00000231656 TLCD2A6NGC4 264 aa21.34■■□□□ 1.01
CDX1-201ENST00000231656 PABPC4LP0CB38 370 aaKnown RBP21.34■■□□□ 1.01
CDX1-201ENST00000231656 RPL5P46777 297 aaKnown RBP21.34■■□□□ 1.01
CDX1-201ENST00000231656 CDK9P50750 372 aaKnown RBP21.34■■□□□ 1.01
CDX1-201ENST00000231656 CDK6Q00534 326 aa21.34■■□□□ 1.01
CDX1-201ENST00000231656 CFHR1Q03591 330 aa21.34■■□□□ 1.01
CDX1-201ENST00000231656 C19orf47Q8N9M1 422 aaKnown RBP21.34■■□□□ 1.01
CDX1-201ENST00000231656 TSPAN14Q8NG11 270 aa21.34■■□□□ 1.01
CDX1-201ENST00000231656 THAP11Q96EK4 314 aa21.34■■□□□ 1.01
CDX1-201ENST00000231656 TOR3AQ9H497 397 aa21.34■■□□□ 1.01
CDX1-201ENST00000231656 CLK4Q9HAZ1 481 aaKnown RBP21.34■■□□□ 1.01
CDX1-201ENST00000231656 FAM60AQ9NP50 221 aa21.34■■□□□ 1.01
CDX1-201ENST00000231656 DNAAF2Q9NVR5 837 aaKnown RBP21.34■■□□□ 1.01
CDX1-201ENST00000231656 U3KQV3 271 aa21.34■■□□□ 1.01
CDX1-201ENST00000231656 CASC3O15234 703 aaKnown RBP21.33■■□□□ 1.01
CDX1-201ENST00000231656 B4GALT2O60909 372 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 ATP6V1B1P15313 513 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 TSFMP43897 325 aaKnown RBP21.33■■□□□ 1.01
CDX1-201ENST00000231656 ITGA1P56199 1179 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 PCBP3P57721 371 aaKnown RBP21.33■■□□□ 1.01
CDX1-201ENST00000231656 DSTNP60981 165 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 STXBP1P61764 594 aaKnown RBP21.33■■□□□ 1.01
CDX1-201ENST00000231656 SELENOWP63302 87 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 HSPB3Q12988 150 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 KCTD21Q4G0X4 260 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 PERM1Q5SV97 790 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 FRMPD2BQ6IN97 320 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 USP53Q70EK8 1073 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 SRFBP1Q8NEF9 429 aaKnown RBP21.33■■□□□ 1.01
CDX1-201ENST00000231656 TAMM41Q96BW9 452 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 TM4SF19Q96DZ7 209 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 CD180Q99467 661 aa21.33■■□□□ 1.01
CDX1-201ENST00000231656 LOC105369274A0A096LPK9 316 aa21.33■■□□□ 1
CDX1-201ENST00000231656 LOC102723532A0A0G2JNH3 316 aa21.33■■□□□ 1
CDX1-201ENST00000231656 A0A1W2PR48 441 aa21.33■■□□□ 1
CDX1-201ENST00000231656 SH3BP5O60239 455 aa21.33■■□□□ 1
CDX1-201ENST00000231656 DPM1O60762 260 aa21.33■■□□□ 1
CDX1-201ENST00000231656 DIRAS1O95057 198 aa21.33■■□□□ 1
CDX1-201ENST00000231656 ZNF806P0C7X5 589 aa21.33■■□□□ 1
CDX1-201ENST00000231656 PRKACGP22612 351 aa21.33■■□□□ 1
CDX1-201ENST00000231656 SUZ12Q15022 739 aaKnown RBP21.33■■□□□ 1
CDX1-201ENST00000231656 PROX2Q3B8N5 592 aa21.33■■□□□ 1
CDX1-201ENST00000231656 TTC33Q6PID6 262 aaPredicted RBP21.33■■□□□ 1
CDX1-201ENST00000231656 DBX2Q6ZNG2 339 aa21.33■■□□□ 1
CDX1-201ENST00000231656 ASPGQ86U10 573 aa21.33■■□□□ 1
CDX1-201ENST00000231656 SATL1Q86VE3 508 aa21.33■■□□□ 1
CDX1-201ENST00000231656 PLXDC1Q8IUK5 500 aa21.33■■□□□ 1
CDX1-201ENST00000231656 OR4N4Q8N0Y3 316 aa21.33■■□□□ 1
CDX1-201ENST00000231656 METTL25Q8N6Q8 603 aa21.33■■□□□ 1
CDX1-201ENST00000231656 NT5CQ8TCD5 201 aa21.33■■□□□ 1
CDX1-201ENST00000231656 PRRX2Q99811 253 aa21.33■■□□□ 1
CDX1-201ENST00000231656 SLC35C2Q9NQQ7 365 aa21.33■■□□□ 1
CDX1-201ENST00000231656 TMEFF2Q9UIK5 374 aaPredicted RBP21.33■■□□□ 1
CDX1-201ENST00000231656 ATG4BQ9Y4P1 393 aa21.33■■□□□ 1
CDX1-201ENST00000231656 IGHV5-51A0A0C4DH38 117 aa21.32■■□□□ 1
CDX1-201ENST00000231656 TRIM64A6NGJ6 449 aa21.32■■□□□ 1
CDX1-201ENST00000231656 PRKRAO75569 313 aaKnown RBP21.32■■□□□ 1
CDX1-201ENST00000231656 CERS1P27544 350 aa21.32■■□□□ 1
CDX1-201ENST00000231656 CSF2RBP32927 897 aa21.32■■□□□ 1
CDX1-201ENST00000231656 RAB8AP61006 207 aa21.32■■□□□ 1
CDX1-201ENST00000231656 EPS8Q12929 822 aa21.32■■□□□ 1
CDX1-201ENST00000231656 SF3A2Q15428 464 aaKnown RBP21.32■■□□□ 1
CDX1-201ENST00000231656 CRB2Q5IJ48 1285 aa21.32■■□□□ 1
CDX1-201ENST00000231656 ZC3H7AQ8IWR0 971 aaKnown RBP21.32■■□□□ 1
CDX1-201ENST00000231656 SLC30A8Q8IWU4 369 aa21.32■■□□□ 1
CDX1-201ENST00000231656 ZNF786Q8N393 782 aa21.32■■□□□ 1
CDX1-201ENST00000231656 ZFP28Q8NHY6 868 aa21.32■■□□□ 1
CDX1-201ENST00000231656 NAT6Q93015 286 aa21.32■■□□□ 1
CDX1-201ENST00000231656 AMDHD1Q96NU7 426 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms