RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 HAO1Q9UJM8 370 aa9.55□□□□□ -0.88
SDF2-209ENST00000591903 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.55□□□□□ -0.88
SDF2-209ENST00000591903 LOC105369274A0A096LPK9 316 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 LOC102723532A0A0G2JNH3 316 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 FOXE1O00358 373 aaPredicted RBP9.54□□□□□ -0.88
SDF2-209ENST00000591903 OR7A17O14581 309 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 CLEC3AO75596 197 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 FGF4P08620 206 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 CDH1P12830 882 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 HSD3B1P14060 373 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 HSD3B2P26439 372 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 HOXC12P31275 282 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 GDF5P43026 501 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 SCTRP47872 440 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 CCNG1P51959 295 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 NAGLUP54802 743 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 WDR4P57081 412 aaKnown RBP9.54□□□□□ -0.88
SDF2-209ENST00000591903 PHEXP78562 749 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 TRAF3Q13114 568 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 RCN2Q14257 317 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 DEFB113Q30KQ7 82 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 XKR6Q5GH73 641 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 RNFT1Q5M7Z0 435 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 ATG16L1Q676U5 607 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 ARHGAP11AQ6P4F7 1023 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 ARSKQ6UWY0 536 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 TMIGD1Q6UXZ0 262 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 GPRIN3Q6ZVF9 776 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 CDC20BQ86Y33 519 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 CCDC71Q8IV32 467 aaPredicted RBP9.54□□□□□ -0.88
SDF2-209ENST00000591903 ZC3H7AQ8IWR0 971 aaKnown RBP9.54□□□□□ -0.88
SDF2-209ENST00000591903 ZZZ3Q8IYH5 903 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 OR4N4Q8N0Y3 316 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 SNX31Q8N9S9 440 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 MFSD9Q8NBP5 474 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 WFDC11Q8NEX6 87 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 TMEM125Q96AQ2 219 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 METTL2AQ96IZ6 378 aaKnown RBP9.54□□□□□ -0.88
SDF2-209ENST00000591903 OR2A5Q96R48 311 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 ACAT2Q9BWD1 397 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 GATA5Q9BWX5 397 aaPredicted RBP9.54□□□□□ -0.88
SDF2-209ENST00000591903 SLC6A16Q9GZN6 736 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 ACTR8Q9H981 624 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 CLK4Q9HAZ1 481 aaKnown RBP9.54□□□□□ -0.88
SDF2-209ENST00000591903 INTS9Q9NV88 658 aaKnown RBP9.54□□□□□ -0.88
SDF2-209ENST00000591903 CIDEBQ9UHD4 219 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 ZFP69BQ9UJL9 534 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 ZNF407Q9C0G0 2248 aa9.54□□□□□ -0.88
SDF2-209ENST00000591903 HRNRQ86YZ3 2850 aaPredicted RBP9.53□□□□□ -0.88
SDF2-209ENST00000591903 URADA6NGE7 173 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 NPIPB8E9PQR5 432 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 H0YGG7 62 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 KLRC4-KLRK1H3BQV0 150 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 H7BY64 318 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 FFAR3O14843 346 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 GPR42O15529 346 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 SERPINA6P08185 405 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 SLC35G6P0C7Q6 338 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 KIR2DL3P43628 341 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 NUP107P57740 925 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 ARF3P61204 181 aaPredicted RBP9.53□□□□□ -0.88
SDF2-209ENST00000591903 SKP1P63208 163 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 PMPCAQ10713 525 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 CHIT1Q13231 466 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 TSTA3Q13630 321 aaPredicted RBP9.53□□□□□ -0.88
SDF2-209ENST00000591903 KEAP1Q14145 624 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 FAM53BQ14153 422 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 DOC2AQ14183 400 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 C18orf21Q32NC0 220 aaPredicted RBP9.53□□□□□ -0.88
SDF2-209ENST00000591903 MED27Q6P2C8 311 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 FBXO42Q6P3S6 717 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 PAOXQ6QHF9 649 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 MILR1Q7Z6M3 343 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 CSNK1A1LQ8N752 337 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 CAMKVQ8NCB2 501 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 SRFBP1Q8NEF9 429 aaKnown RBP9.53□□□□□ -0.88
SDF2-209ENST00000591903 NT5CQ8TCD5 201 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 ATP6V1E2Q96A05 226 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 RERGQ96A58 199 aaPredicted RBP9.53□□□□□ -0.88
SDF2-209ENST00000591903 ESAMQ96AP7 390 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 TM4SF19Q96DZ7 209 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 PRAP1Q96NZ9 151 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 NPAS2Q99743 824 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 VN1R1Q9GZP7 353 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 CCDC134Q9H6E4 229 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 NOL11Q9H8H0 719 aaKnown RBP9.53□□□□□ -0.88
SDF2-209ENST00000591903 BRF2Q9HAW0 419 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 NEUROD4Q9HD90 331 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 PFDN4Q9NQP4 134 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 PLSCR2Q9NRY7 297 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 THAP1Q9NVV9 213 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 SNX6Q9UNH7 406 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 RUVBL1Q9Y265 456 aaKnown RBP9.53□□□□□ -0.88
SDF2-209ENST00000591903 KLF13Q9Y2Y9 288 aaPredicted RBP9.53□□□□□ -0.88
SDF2-209ENST00000591903 ARHGAP21Q5T5U3 1957 aa9.53□□□□□ -0.88
SDF2-209ENST00000591903 ANKDD1BA6NHY2 528 aa9.52□□□□□ -0.89
SDF2-209ENST00000591903 A6NNC1 897 aa9.52□□□□□ -0.89
SDF2-209ENST00000591903 HAT1O14929 419 aa9.52□□□□□ -0.89
SDF2-209ENST00000591903 CDC40O60508 579 aaKnown RBP eCLIP9.52□□□□□ -0.89
SDF2-209ENST00000591903 PRAMEF4O60810 478 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms