RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 SGCZQ96LD1 299 aa12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 GPR78Q96P69 363 aa12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 CNPPD1Q9BV87 410 aa12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 TRIM8Q9BZR9 551 aa12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 TP63Q9H3D4 680 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 CDC42EP4Q9H3Q1 356 aaKnown RBP12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 NOL11Q9H8H0 719 aaKnown RBP12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 LYARQ9NX58 379 aaKnown RBP12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 RNF11Q9Y3C5 154 aa12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 HRH3Q9Y5N1 445 aa12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 IKBKGQ9Y6K9 419 aa12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 HIVEP1P15822 2718 aa12.38□□□□□ -0.43
PRKCSH-201ENST00000585325 IQANK1A0A1B0GTG1 560 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 GLOD5A6NK44 160 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 NPIPA2E9PIF3 369 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 NPIPA3F8WFD2 350 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 HRKO00198 91 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 PROM1O43490 865 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 TMPRSS11DO60235 418 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 OR10H2O60403 315 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 EEDO75530 441 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 CLDN9O95484 217 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 ACSL3O95573 720 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 INHBAP08476 426 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 FAM58BPP0C7Q3 252 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 CCL3P10147 92 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 NR2F6P10588 404 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 MAGEA5P43359 124 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 KIR3DL1P43629 444 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 DNASE1L1P49184 302 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 NEK2P51955 445 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 HERVK_113P63132 956 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 ERVK-8P63133 956 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 CUL3Q13618 768 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 ZNF267Q14586 743 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 WHAMMP3Q1A5X7 153 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 PIGGQ5H8A4 983 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 NDUFAF5Q5TEU4 345 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 TMEM211Q6ICI0 200 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 TAOK1Q7L7X3 1001 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 NUDT13Q86X67 352 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 ST13P4Q8IZP2 240 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 MARVELD2Q8N4S9 558 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 PTGR2Q8N8N7 351 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 L3MBTL4Q8NA19 623 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 NUBPLQ8TB37 319 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 WDR20Q8TBZ3 569 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 IFT81Q8WYA0 676 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 PHF21BQ96EK2 531 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 FBXL20Q96IG2 436 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 CDK15Q96Q40 435 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 GAL3ST4Q96RP7 486 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 PELOQ9BRX2 385 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 ERVK-6Q9BXR3 956 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 ZNF717Q9BY31 904 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 ZDHHC11Q9H8X9 412 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 WDR41Q9HAD4 459 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 IL1RL2Q9HB29 575 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 ZNF358Q9NW07 568 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 ERVK-19Q9WJR5 959 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 CELSR1Q9NYQ6 3014 aa12.37□□□□□ -0.43
PRKCSH-201ENST00000585325 EML6Q6ZMW3 1958 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 PCNX1Q96RV3 2341 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 A0A0A6YYD5 115 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 A0A1W2PR48 441 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 WASHC1A8K0Z3 465 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 OR7A17O14581 309 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 DIAPH2O60879 1101 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 GLSO94925 669 aaPredicted RBP12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 GPR75O95800 540 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 GBAP04062 536 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 IGKV3-11P04433 115 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 RBP1P09455 135 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 BSGP35613 385 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 CCNG1P51959 295 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 TTC19Q6DKK2 380 aaPredicted RBP12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 MRM1Q6IN84 353 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 METTL2BQ6P1Q9 378 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 RNF111Q6ZNA4 994 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 SLC29A4Q7RTT9 530 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 RELL1Q8IUW5 271 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 FAM109AQ8N4B1 249 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 RPRMLQ8N4K4 120 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 TMEM251Q8N6I4 163 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 OR52B6Q8NGF0 335 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 OR5M3Q8NGP4 307 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 SLC44A1Q8WWI5 657 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 RIT1Q92963 219 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 SMC6Q96SB8 1091 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 PAFAH2Q99487 392 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 DDX31Q9H8H2 851 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 TUBA8Q9NY65 449 aaPredicted RBP12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 XPR1Q9UBH6 696 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 ASB4Q9Y574 426 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 LIPGQ9Y5X9 500 aa12.36□□□□□ -0.43
PRKCSH-201ENST00000585325 ATP6AP2A0A1C7CYW4 349 aa12.35□□□□□ -0.43
PRKCSH-201ENST00000585325 POC1B-GALNT4F8VUJ3 575 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms