RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 LTBP3Q9NS15 1303 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 J3QLW9 94 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 PRLP01236 227 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 GASTP01350 101 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 FCER2P06734 321 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 INHBBP09529 407 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 CLEC2LP0C7M8 214 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 HOXD8P13378 290 aaPredicted RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 SELPP16109 830 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 ZNF19P17023 458 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 GPX2P18283 190 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 MAPK9P45984 424 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 MTNR1AP48039 350 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 SGSHP51688 502 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 AP2S1P53680 142 aaPredicted RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 MAZP56270 477 aaKnown RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 PRR5P85299 388 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 TMEM115Q12893 351 aaPredicted RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 LARS2Q15031 903 aaKnown RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 OR51I1Q9H343 314 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 RDH14Q9HBH5 336 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 BRD7Q9NPI1 651 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 BTNL2Q9UIR0 455 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 FER1L6Q2WGJ9 1857 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 POP7O75817 140 aaKnown RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 ALPPP05187 535 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 C1GALT1C1LP0DN25 315 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 HSD3B1P14060 373 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 HPGDP15428 266 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 UQCRC2P22695 453 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 HSD3B2P26439 372 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 HTR3AP46098 478 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 SLC14A1Q13336 389 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 NDUFA9Q16795 377 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 COX20Q5RI15 118 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 AFMIDQ63HM1 303 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 TNFAIP8L1Q8WVP5 186 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 ZNF566Q969W8 418 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 SCLYQ96I15 445 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 FUZQ9BT04 418 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 BHLHE41Q9C0J9 482 aaPredicted RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 C11orf54Q9H0W9 315 aaPredicted RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 CNOT2Q9NZN8 540 aaKnown RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 STOX2Q9P2F5 926 aaPredicted RBP10.05□□□□□ -0.8
USB1-212ENST00000566082 SRRDQ9UH36 339 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 MGAT4AQ9UM21 535 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 PCDHGB2Q9Y5G2 931 aa10.05□□□□□ -0.8
USB1-212ENST00000566082 PTPRFP10586 1907 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 IGLV3-10A0A075B6K4 115 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 LOC105369274A0A096LPK9 316 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 ABHD14A-ACY1A0A1B0GW23 586 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 RIIAD1A6NNX1 92 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 SMLR1H3BR10 107 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 MEN1O00255 615 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 HPGDSO60760 199 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 KDM4BO94953 1096 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 ANXA3P12429 323 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 CD9P21926 228 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 ALAS2P22557 587 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 DNASE1P24855 282 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 KHKP50053 298 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 WNT4P56705 351 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 CDC20Q12834 499 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 DSG2Q14126 1118 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 ARHGEF6Q15052 776 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 NTRK2Q16620 822 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 MSRB3Q8IXL7 192 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 OR4N4Q8N0Y3 316 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 FOXJ1Q92949 421 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 HYLS1Q96M11 299 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 F2RL3Q96RI0 385 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 SORBS1Q9BX66 1292 aaKnown RBP10.04□□□□□ -0.8
USB1-212ENST00000566082 MKRN2Q9H000 416 aaKnown RBP10.04□□□□□ -0.8
USB1-212ENST00000566082 NEUROD4Q9HD90 331 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 MCM3APO60318 1980 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 LY75O60449 1722 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 A0A1W2PRG6 482 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 TBC1D3BA6NDS4 549 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 HCN1O60741 890 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 KLKB1P03952 638 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 MRPL3P09001 348 aaKnown RBP10.04□□□□□ -0.8
USB1-212ENST00000566082 MPC1LP0DKB6 136 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 PTGER1P34995 402 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 TGM4P49221 684 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 STARP49675 285 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 CLLU1OSQ5K130 101 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 LRIF1Q5T3J3 769 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 ZNF767PQ75MW2 155 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 ZNF461Q8TAF7 563 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 C16orf78Q8WTQ4 265 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 SUSD6Q92537 303 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 CCDC120Q96HB5 630 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 GAL3ST1Q99999 423 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 ALOXE3Q9BYJ1 711 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 HCSTQ9UBK5 93 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 EXOSC1Q9Y3B2 195 aaKnown RBP10.04□□□□□ -0.8
USB1-212ENST00000566082 H7BY64 318 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 GNB5O14775 395 aa10.04□□□□□ -0.8
USB1-212ENST00000566082 KLK8O60259 260 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms