RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SLC25A23Q9BV35 468 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 DUSP26Q9BV47 211 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 FAIM2Q9BWQ8 316 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 ALOXE3Q9BYJ1 711 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 BHLHE41Q9C0J9 482 aaPredicted RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 NRSN2Q9GZP1 204 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 PAIP1Q9H074 479 aaKnown RBP5.59□□□□□ -1.51
USP39-213ENST00000467885 CHST8Q9H2A9 424 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 SLC26A1Q9H2B4 701 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 GLIPR2Q9H4G4 154 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 EPS8L2Q9H6S3 715 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 POLR1BQ9H9Y6 1135 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 EFCAB1Q9HAE3 211 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 FANCEQ9HB96 536 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 PRM3Q9NNZ6 103 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 SLAMF7Q9NQ25 335 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 SLC6A13Q9NSD5 602 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 IRAK4Q9NWZ3 460 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 FOXJ2Q9P0K8 574 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 HCN3Q9P1Z3 774 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 C5AR2Q9P296 337 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 TRPC4Q9UBN4 977 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 PISDQ9UG56 409 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 NDOR1Q9UHB4 597 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 PHF11Q9UIL8 331 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 BTNL2Q9UIR0 455 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 PSME2Q9UL46 239 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 SRPK3Q9UPE1 567 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 MAPRE3Q9UPY8 281 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 MAN2B2Q9Y2E5 1009 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 PCDHGA7Q9Y5G6 932 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 GMEB1Q9Y692 573 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 CAPN7Q9Y6W3 813 aa5.59□□□□□ -1.51
USP39-213ENST00000467885 HEATR5BQ9P2D3 2071 aa5.59□□□□□ -1.52
USP39-213ENST00000467885 DMXL1Q9Y485 3027 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 IGKV3D-11A0A0A0MRZ8 115 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 TRBV5-3A0A0A0MS03 114 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 BLACEA4D250 179 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CCDC154A6NI56 674 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CDRT15L2A8MXV6 281 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 PLOD2O00469 737 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CLDN4O14493 209 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 AIM2O14862 343 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 GSC2O15499 205 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CFLARO15519 480 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 FGF17O60258 216 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 LDB3O75112 727 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 ERAL1O75616 437 aaKnown RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 CPSF4O95639 269 aaKnown RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 FHP07954 510 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 ZCCHC18P0CG32 403 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 SLC35E2P0CK97 266 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 COX7A2P14406 83 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 PORP16435 677 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 CSNK2A2P19784 350 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 EFNA1P20827 205 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 AGXTP21549 392 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CALB2P22676 271 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 F8A1P23610 371 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 SLC5A2P31639 672 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 MPIP34949 423 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 RPL3P39023 403 aaKnown RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 BUD31P41223 144 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 CDKN2CP42773 168 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 KIR3DL1P43629 444 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 XCR1P46094 333 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 ALDH9A1P49189 494 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 GPR143P51810 404 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CLNS1AP54105 237 aaKnown RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 HSD17B7P56937 341 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 KCNK10P57789 538 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 HBA1P69905 142 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 SHC2P98077 582 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 PLIN5Q00G26 463 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 TNFRSF17Q02223 184 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 ID2Q02363 134 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 FOLH1Q04609 750 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 MAP4K2Q12851 820 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 BIKQ13323 160 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 MAPKAPK3Q16644 382 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 ZSCAN26Q16670 478 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 DPY19L1Q2PZI1 675 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 RUNDC3AQ59EK9 446 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 C4orf48Q5BLP8 95 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 COQ5Q5HYK3 327 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 C3orf38Q5JPI3 329 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 LRIF1Q5T3J3 769 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 TMEM164Q5U3C3 297 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 ANXA8L1Q5VT79 327 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 MLIPQ5VWP3 458 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 NANOGP8Q6NSW7 305 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CYB5D1Q6P9G0 228 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 FAM111BQ6SJ93 734 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 C6orf15Q6UXA7 325 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 ZNF551Q7Z340 670 aaPredicted RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 YTHDF3Q7Z739 585 aaKnown RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 ZC3H7AQ8IWR0 971 aaKnown RBP5.58□□□□□ -1.52
USP39-213ENST00000467885 MSRB3Q8IXL7 192 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 SLC15A3Q8IY34 581 aa5.58□□□□□ -1.52
USP39-213ENST00000467885 CLECL1Q8IZS7 167 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms