RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MACC1Q6ZN28 852 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 DET1Q7L5Y6 550 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PIGWQ7Z7B1 504 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ADAMTSL2Q86TH1 951 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 IGFN1Q86VF2 1251 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RALGPS2Q86X27 583 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 HDDC3Q8N4P3 179 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RBMXL3Q8N7X1 1067 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZNF781Q8N8C0 355 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RFWD2Q8NHY2 731 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RHEBL1Q8TAI7 183 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 STAG3L4Q8TBR4 150 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 LKAAEAR1Q8TD35 194 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 CD200R1Q8TD46 325 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SKA2Q8WVK7 121 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ANKRD49Q8WVL7 239 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PPM1EQ8WY54 764 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ELMO1Q92556 727 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PTERQ96BW5 349 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 EID2BQ96D98 161 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ERP27Q96DN0 273 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PHF21BQ96EK2 531 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 DTD2Q96FN9 168 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RMDN2Q96LZ7 410 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM237Q96Q45 408 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 VPS35Q96QK1 796 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ACOX2Q99424 681 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 EGFL8Q99944 293 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RPP25Q9BUL9 199 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RIOK2Q9BVS4 552 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 DRC3Q9H069 523 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ILKAPQ9H0C8 392 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ABCG8Q9H221 673 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 P2RY12Q9H244 342 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 TTYH1Q9H313 450 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM245Q9H330 911 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 TFB2MQ9H5Q4 396 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 STN1Q9H668 368 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 UBE2ZQ9H832 354 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 EML4Q9HC35 981 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 IL26Q9NPH9 171 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRSS16Q9NQE7 514 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 TXLNGQ9NUQ3 528 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SPATS2LQ9NUQ6 558 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ABCF3Q9NUQ8 709 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SMOXQ9NWM0 555 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 CD274Q9NZQ7 290 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SARDHQ9UL12 918 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 NCKAP1Q9Y2A7 1128 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 STK38LQ9Y2H1 464 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 DHRS7Q9Y394 339 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RRP15Q9Y3B9 282 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 FIS1Q9Y3D6 152 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RAP2CQ9Y3L5 183 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ANGPTL3Q9Y5C1 460 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PTGDR2Q9Y5Y4 395 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PIAS3Q9Y6X2 628 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZFC3H1O60293 1989 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PIKFYVEQ9Y2I7 2098 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 TP53BP1Q12888 1972 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 GOLGA8QA0A0J9YX86 632 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCDC189A1A4V9 331 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 GOLGA8OA6NCC3 632 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 GAGE12JA6NER3 117 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRR23AA6NEV1 266 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 NEMP2A6NFY4 417 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 NCF1BA6NI72 391 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR2AG2A6NM03 316 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 TRPC5OSA6NMA1 111 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 NCF1CA8MVU1 366 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 GOLGA8NF8WBI6 632 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 STX16-NPEPL1H3BU86 382 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 EIF3FO00303 357 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CDC7O00311 574 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 STX16O14662 325 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 MID1O15344 667 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ITM2AO43736 263 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 MTX2O75431 263 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 SKAP2O75563 359 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 RNASEH2AO75792 299 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATP5HO75947 161 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 TM7SF2O76062 418 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 RECQL5O94762 991 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 AP2A2O94973 939 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 WISP3O95389 354 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 EGFP01133 1207 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 C8GP07360 202 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CHRNGP07510 517 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 HIST1H2AGP0C0S8 130 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 MPC1LP0DKB6 136 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ACADMP11310 421 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ENO3P13929 434 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATP1B2P14415 290 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 NCF1P14598 390 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 VCLP18206 1134 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 HIST1H2ADP20671 130 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CYP2A7P20853 494 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CD9P21926 228 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 SERPINB3P29508 390 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 EEF1DP29692 281 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms