RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 OLFM2O95897 454 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 TCRBP04435 133 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 ALDOBP05062 364 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 FABP1P07148 127 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 CXCL2P19875 107 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 KIR3DL1P43629 444 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 ARHGDIBP52566 201 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 PURAQ00577 322 aaKnown RBP12.19□□□□□ -0.46
HERC3-203ENST00000407637 ZBTB6Q15916 424 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 DUOXA1Q1HG43 343 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 MARC1Q5VT66 337 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 TRIM46Q7Z4K8 759 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 UXS1Q8NBZ7 420 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 NSMAFQ92636 917 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 PARK7Q99497 189 aaKnown RBP12.19□□□□□ -0.46
HERC3-203ENST00000407637 SLC38A3Q99624 504 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 COPS8Q99627 209 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 CHIAQ9BZP6 476 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 EVA1AQ9H8M9 152 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 ENAMQ9NRM1 1142 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 ASB4Q9Y574 426 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 SHISA3A0PJX4 238 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 MOCS2O96007 188 aaPredicted RBP12.19□□□□□ -0.46
HERC3-203ENST00000407637 PKMP14618 531 aaKnown RBP12.19□□□□□ -0.46
HERC3-203ENST00000407637 SDC1P18827 310 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 ITPKAP23677 461 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 RENBPP51606 427 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 FGL1Q08830 312 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 CRHR2Q13324 411 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 VEZF1Q14119 521 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 TCTE1Q5JU00 501 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 MFSD14CQ5VZR4 134 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 RAET1GQ6H3X3 334 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 USP45Q70EL2 814 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 PLA2G15Q8NCC3 412 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 NANPQ8TBE9 248 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 MRPS24Q96EL2 167 aaKnown RBP12.19□□□□□ -0.46
HERC3-203ENST00000407637 NLGN3Q9NZ94 848 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 RHCGQ9UBD6 479 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 PURGQ9UJV8 347 aaKnown RBP12.19□□□□□ -0.46
HERC3-203ENST00000407637 ING1Q9UK53 422 aaPredicted RBP12.19□□□□□ -0.46
HERC3-203ENST00000407637 PCOLCE2Q9UKZ9 415 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 GSTK1Q9Y2Q3 226 aa12.19□□□□□ -0.46
HERC3-203ENST00000407637 SF3B6Q9Y3B4 125 aaKnown RBP12.19□□□□□ -0.46
HERC3-203ENST00000407637 CASC3O15234 703 aaKnown RBP12.18□□□□□ -0.46
HERC3-203ENST00000407637 TAPBPO15533 448 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 FFAR2O15552 330 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 PEX10O60683 326 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 GCM2O75603 506 aaPredicted RBP12.18□□□□□ -0.46
HERC3-203ENST00000407637 GASTP01350 101 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 SPOUT1Q5T280 376 aaKnown RBP12.18□□□□□ -0.46
HERC3-203ENST00000407637 NOTUMQ6P988 496 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 SBSNQ6UWP8 590 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 ZNF687Q8N1G0 1237 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 ZNF527Q8NB42 609 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 HMCESQ96FZ2 354 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 FCRL2Q96LA5 508 aaPredicted RBP12.18□□□□□ -0.46
HERC3-203ENST00000407637 DMRTA2Q96SC8 542 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 SAP130Q9H0E3 1048 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 PDGFCQ9NRA1 345 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 NUBP2Q9Y5Y2 271 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 UPK3BL1B0FP48 263 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 UPK3BL2E5RIL1 263 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 PIRO00625 290 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 SIX6O95475 246 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 INSRRP14616 1297 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 GIFP27352 417 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 RAB13P51153 203 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 CASP9P55211 416 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 ZSWIM7Q19AV6 140 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 GSG1Q2KHT4 349 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 RNASE12Q5GAN4 147 aaKnown RBP12.18□□□□□ -0.46
HERC3-203ENST00000407637 MANEALQ5VSG8 457 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 AFMIDQ63HM1 303 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 PSAPL1Q6NUJ1 521 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 SLC27A4Q6P1M0 643 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 IL20RBQ6UXL0 311 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 CEACAM20Q6UY09 585 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 PIANPQ8IYJ0 282 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 STK40Q8N2I9 435 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 ARRDC2Q8TBH0 407 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 WDR20Q8TBZ3 569 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 SPRTNQ9H040 489 aaPredicted RBP12.18□□□□□ -0.46
HERC3-203ENST00000407637 NMNAT1Q9HAN9 279 aaPredicted RBP12.18□□□□□ -0.46
HERC3-203ENST00000407637 OR6C2Q9NZP2 312 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 EMC3Q9P0I2 261 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 FZD4Q9ULV1 537 aa12.18□□□□□ -0.46
HERC3-203ENST00000407637 RPL36Q9Y3U8 105 aaKnown RBP12.18□□□□□ -0.46
HERC3-203ENST00000407637 ANXA2P2A6NMY6 339 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 MPTX1A8MV57 137 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 LOC730098B7Z3J9 87 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 L7N2F9 121 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 S100A6P06703 90 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 C1SP09871 688 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 HOXC13P31276 330 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 RPL9P32969 192 aaKnown RBP12.17□□□□□ -0.46
HERC3-203ENST00000407637 MMP12P39900 470 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 CCR6P51684 374 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 ERVK-25P63136 954 aa12.17□□□□□ -0.46
HERC3-203ENST00000407637 SELENOWP63302 87 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms