RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 GAREM2Q75VX8 874 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 OR2T33Q8NG76 320 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 OR2A12Q8NGT7 310 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 PRODH2Q9UF12 536 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 EBF1Q9UH73 591 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 J3QLW9 94 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF19P17023 458 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 F8A1P23610 371 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 ARHGAP40Q5TG30 622 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 KRT77Q7Z794 578 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 SLC5A8Q8N695 610 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF676Q8N7Q3 588 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 PITHD1Q9GZP4 211 aaPredicted RBP15.96■□□□□ 0.15
PHRF1-201ENST00000264555 C8orf33Q9H7E9 229 aaPredicted RBP15.96■□□□□ 0.15
PHRF1-201ENST00000264555 MOV10Q9HCE1 1003 aaKnown RBP15.96■□□□□ 0.15
PHRF1-201ENST00000264555 SERTAD3Q9UJW9 196 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 AP1M2Q9Y6Q5 423 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 A0A0G2JPF8 293 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 ZNF879B4DU55 563 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 HNRNPCL3B7ZW38 293 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 HNRNPCL4P0DMR1 293 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 EDNRAP25101 427 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 PMS2P3Q13401 168 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 GGTA1PQ4G0N0 100 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 RETREG3Q86VR2 466 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 TSACCQ96A04 125 aaPredicted RBP15.96■□□□□ 0.15
PHRF1-201ENST00000264555 LGALS12Q96DT0 336 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 OMA1Q96E52 524 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 NECTIN4Q96NY8 510 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 G6PC3Q9BUM1 346 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 DNMT3BQ9UBC3 853 aaKnown RBP15.96■□□□□ 0.15
PHRF1-201ENST00000264555 UBR3Q6ZT12 1888 aa15.96■□□□□ 0.15
PHRF1-201ENST00000264555 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.96■□□□□ 0.14
PHRF1-201ENST00000264555 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.96■□□□□ 0.14
PHRF1-201ENST00000264555 GSTT2BP0CG30 244 aa15.96■□□□□ 0.14
PHRF1-201ENST00000264555 PORP16435 677 aaPredicted RBP15.96■□□□□ 0.14
PHRF1-201ENST00000264555 DDCP20711 480 aa15.96■□□□□ 0.14
PHRF1-201ENST00000264555 FUT4P22083 530 aa15.96■□□□□ 0.14
PHRF1-201ENST00000264555 CD47Q08722 323 aa15.96■□□□□ 0.14
PHRF1-201ENST00000264555 PSD4Q8NDX1 1056 aa15.96■□□□□ 0.14
PHRF1-201ENST00000264555 SAGE1Q9NXZ1 904 aa15.96■□□□□ 0.14
PHRF1-201ENST00000264555 CPED1A4D0V7 1026 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 GPR89AB7ZAQ6 455 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 MMP2P08253 660 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 GPR89BP0CG08 455 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 NANOGNBQ7Z5D8 188 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 SLC22A16Q86VW1 577 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 CSNK1A1LQ8N752 337 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 UBTD2Q8WUN7 234 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 ADAD1Q96M93 576 aaKnown RBP15.95■□□□□ 0.14
PHRF1-201ENST00000264555 GABRR3A8MPY1 467 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 UBFD1O14562 309 aaKnown RBP15.95■□□□□ 0.14
PHRF1-201ENST00000264555 OR7A17O14581 309 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 AK1P00568 194 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 MT-ND5P03915 603 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 GNALP38405 381 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 ZNF45Q02386 682 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 PTPRRQ15256 657 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 RPL13AP3Q6NVV1 102 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 FUNDC2Q9BWH2 189 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 MYNNQ9NPC7 610 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 SERINC1Q9NRX5 453 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 PAK1IP1Q9NWT1 392 aaPredicted RBP15.95■□□□□ 0.14
PHRF1-201ENST00000264555 C1orf105O95561 183 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 PSKH1P11801 424 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 SLC3A1Q07837 685 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 PUM1Q14671 1186 aaKnown RBP eCLIP15.95■□□□□ 0.142e-8■■□□□ 12.1
PHRF1-201ENST00000264555 AFMIDQ63HM1 303 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 OR56A3Q8NH54 315 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 MMABQ96EY8 250 aaPredicted RBP15.95■□□□□ 0.14
PHRF1-201ENST00000264555 ASPNQ9BXN1 380 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 KCNK12Q9HB15 430 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 SH3D21A4FU49 640 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 ZNF670-ZNF695F2Z2N8 137 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 STSP08842 583 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 HMGA1P17096 107 aaKnown RBP15.95■□□□□ 0.14
PHRF1-201ENST00000264555 CBLBQ13191 982 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 MRPL58Q14197 206 aaKnown RBP15.95■□□□□ 0.14
PHRF1-201ENST00000264555 MICAQ29983 383 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 SLC35F1Q5T1Q4 408 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 PRSS48Q7RTY5 328 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 GPR149Q86SP6 731 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 CDH24Q86UP0 819 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 PELI3Q8N2H9 469 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 ZNF480Q8WV37 535 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 CIDECQ96AQ7 238 aaPredicted RBP15.95■□□□□ 0.14
PHRF1-201ENST00000264555 ZDHHC12Q96GR4 267 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 GPR78Q96P69 363 aa15.95■□□□□ 0.14
PHRF1-201ENST00000264555 GFM1Q96RP9 751 aaKnown RBP15.95■□□□□ 0.14
PHRF1-201ENST00000264555 DHPSP49366 369 aaPredicted RBP15.94■□□□□ 0.14
PHRF1-201ENST00000264555 LINGO2Q7L985 606 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 PLA2G15Q8NCC3 412 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 MGLLQ99685 303 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 GINS4Q9BRT9 223 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 PRRG4Q9BZD6 226 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 IL21RQ9HBE5 538 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 HCN3Q9P1Z3 774 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 CMAHPQ9Y471 501 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 LATO43561 262 aa15.94■□□□□ 0.14
PHRF1-201ENST00000264555 PIM1P11309 404 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms