RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 U3KQA8 63 aa21.39■■□□□ 1.01
CDX1-201ENST00000231656 TMEM229AB2RXF0 380 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 H0YAE9 185 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 B4GAT1O43505 415 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 PRAMEF10O60809 474 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 CTSVO60911 334 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 H6PDO95479 791 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 ARFIP1P53367 373 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 NR0B2Q15466 257 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 ABHD17CQ6PCB6 329 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 FCRL4Q96PJ5 515 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 RAB33BQ9H082 229 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 SEMA6CQ9H3T2 930 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 SOX17Q9H6I2 414 aaPredicted RBP21.38■■□□□ 1.01
CDX1-201ENST00000231656 PRDM7Q9NQW5 492 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 TAS2R7Q9NYW3 318 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 C5AR2Q9P296 337 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 PILRAQ9UKJ1 303 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 LNP1A1A4G5 178 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 THRBP10828 461 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 CDH3P22223 829 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 LIN52Q52LA3 116 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 TOR1AIP1Q5JTV8 583 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 Q8N9G6 341 aaPredicted RBP21.38■■□□□ 1.01
CDX1-201ENST00000231656 SUMF1Q8NBK3 374 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 OR2L5Q8NG80 312 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 NCSTNQ92542 709 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 UCN3Q969E3 161 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 CCDC74AQ96AQ1 378 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 AHCYL2Q96HN2 611 aaKnown RBP21.38■■□□□ 1.01
CDX1-201ENST00000231656 RDH12Q96NR8 316 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 SMURF2Q9HAU4 748 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 EPHA6Q9UF33 1036 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 MYRFQ9Y2G1 1151 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 MAP4K5Q9Y4K4 846 aa21.38■■□□□ 1.01
CDX1-201ENST00000231656 EME2A4GXA9 379 aaPredicted RBP21.37■■□□□ 1.01
CDX1-201ENST00000231656 ERI3O43414 337 aaKnown RBP21.37■■□□□ 1.01
CDX1-201ENST00000231656 PGM3O95394 542 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 FABP3P05413 133 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 DRD2P14416 443 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 ST6GAL1P15907 406 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 VLDLRP98155 873 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 RELAQ04206 551 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 PPP1R8Q12972 351 aaKnown RBP21.37■■□□□ 1.01
CDX1-201ENST00000231656 SAXO2Q658L1 398 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 PIWIL3Q7Z3Z3 882 aaKnown RBP21.37■■□□□ 1.01
CDX1-201ENST00000231656 OR6C4Q8NGE1 309 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 EXOSC8Q96B26 276 aaKnown RBP21.37■■□□□ 1.01
CDX1-201ENST00000231656 KCNC2Q96PR1 638 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 TRAPPC9Q96Q05 1148 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 LRFN3Q9BTN0 628 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 NLNQ9BYT8 704 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 EPB41L1Q9H4G0 881 aa21.37■■□□□ 1.01
CDX1-201ENST00000231656 SIRT3Q9NTG7 399 aaPredicted RBP21.37■■□□□ 1.01
CDX1-201ENST00000231656 CLIC3O95833 236 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 CLPTM1O96005 669 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 ALBP02768 609 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 TFAP2AP05549 437 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 PNLIPP16233 465 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 HIST1H1TP22492 207 aaPredicted RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 AQP1P29972 269 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 MANFP55145 182 aaKnown RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 GFERP55789 205 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 GPLD1P80108 840 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 SCARB2Q14108 478 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 IQCCQ4KMZ1 466 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 OR2T5Q6IEZ7 315 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 MRM1Q6IN84 353 aaKnown RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 GUSBP11Q6P575 273 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 SHQ1Q6PI26 577 aaKnown RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 FAM92BQ6ZTR7 304 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 CCDC80Q76M96 950 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 OR2T29Q8NH02 315 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 NFKBIDQ8NI38 313 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 NEURL3Q96EH8 262 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 RMND5BQ96G75 393 aaPredicted RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 TGM7Q96PF1 710 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 OR2A5Q96R48 311 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 MAP3K3Q99759 626 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 RBM4BQ9BQ04 359 aaKnown RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 RBM4Q9BWF3 364 aaKnown RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 NEUROD4Q9HD90 331 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 ADPRHL2Q9NX46 363 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 EHD3Q9NZN3 535 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 ASB4Q9Y574 426 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 A0A0J9YVX5 310 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 CPED1A4D0V7 1026 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 DUX1O43812 170 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 KIF1CO43896 1103 aaKnown RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 E2F6O75461 281 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 ZNF883P0CG24 379 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 ARAFP10398 606 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 ATP5A1P25705 553 aaKnown RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 KCNJ10P78508 379 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 TCF15Q12870 199 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 MLC1Q15049 377 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 ZIK1Q3SY52 487 aaPredicted RBP21.36■■□□□ 1.01
CDX1-201ENST00000231656 AMZ1Q400G9 498 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 NDUFAF5Q5TEU4 345 aa21.36■■□□□ 1.01
CDX1-201ENST00000231656 ANKRD34AQ69YU3 496 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms