RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 JMJD1CQ15652 2540 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 TRGV5A0A0B4J1U4 118 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 H2AFYO75367 372 aaKnown RBP15.99■□□□□ 0.15
RETREG3-210ENST00000590541 WISP3O95389 354 aaPredicted RBP15.99■□□□□ 0.15
RETREG3-210ENST00000590541 CCL3P10147 92 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 CD53P19397 219 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 HPDP32754 393 aaPredicted RBP15.99■□□□□ 0.15
RETREG3-210ENST00000590541 MAGEA4P43358 317 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 HK2P52789 917 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 DCAF7P61962 342 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 REEP5Q00765 189 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 RUNX2Q13950 521 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 ZNF460Q14592 562 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 TGFBIQ15582 683 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 FBXW10Q5XX13 1052 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 POMZP3Q6PJE2 187 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 ULK2Q8IYT8 1036 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 GOLM1Q8NBJ4 401 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 FBXO25Q8TCJ0 367 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 NANOS1Q8WY41 292 aaKnown RBP15.99■□□□□ 0.15
RETREG3-210ENST00000590541 RHBDF1Q96CC6 855 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 TSNARE1Q96NA8 513 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 ZNF395Q9H8N7 513 aaPredicted RBP15.99■□□□□ 0.15
RETREG3-210ENST00000590541 ADAP2Q9NPF8 381 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 SACM1LQ9NTJ5 587 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 GPRC5BQ9NZH0 403 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 ATG4BQ9Y4P1 393 aa15.99■□□□□ 0.15
RETREG3-210ENST00000590541 FAM171A2A8MVW0 826 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 CXorf49A8MYA2 514 aaPredicted RBP15.98■□□□□ 0.15
RETREG3-210ENST00000590541 DVL2O14641 736 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 SERPINA6P08185 405 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 CCDC166P0CW27 439 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 EPXP11678 715 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 GGT5P36269 586 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 HSD17B7P56937 341 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 GPX6P59796 221 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 NKX6-1P78426 367 aaPredicted RBP15.98■□□□□ 0.15
RETREG3-210ENST00000590541 TOR1AIP1Q5JTV8 583 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 SULT1C3Q6IMI6 304 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 HSDL2Q6YN16 418 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 CCDC91Q7Z6B0 441 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 TMPRSS11BQ86T26 416 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 CTAGE3PQ8IX95 158 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 ZNF321PQ8N8H1 164 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 TNIP2Q8NFZ5 429 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 SPATA3Q8NHX4 192 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 SGCZQ96LD1 299 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 EHD1Q9H4M9 534 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 EXO5Q9H790 373 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 PCDHGB3Q9Y5G1 929 aa15.98■□□□□ 0.15
RETREG3-210ENST00000590541 TUBAL3A6NHL2 446 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 KDM4EB2RXH2 506 aaPredicted RBP15.97■□□□□ 0.15
RETREG3-210ENST00000590541 WDR47O94967 919 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 C1GALT1C1LP0DN25 315 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 CEACAM8P31997 349 aaPredicted RBP15.97■□□□□ 0.15
RETREG3-210ENST00000590541 SLC6A12P48065 614 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 RAB10P61026 200 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 BTN3A2P78410 334 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 BMPR2Q13873 1038 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 PCBP2Q15366 365 aaKnown RBP eCLIP15.97■□□□□ 0.15
RETREG3-210ENST00000590541 ELAVL1Q15717 326 aaKnown RBP15.97■□□□□ 0.15
RETREG3-210ENST00000590541 ZKSCAN8Q15776 578 aaPredicted RBP15.97■□□□□ 0.15
RETREG3-210ENST00000590541 KBTBD12Q3ZCT8 623 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 SHEQ5VZ18 495 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 C8orf74Q6P047 294 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 CXXC5Q7LFL8 322 aaKnown RBP15.97■□□□□ 0.15
RETREG3-210ENST00000590541 CCDC25Q86WR0 208 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 GPSM1Q86YR5 675 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 KRT78Q8N1N4 520 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 C17orf53Q8N3J3 647 aaPredicted RBP15.97■□□□□ 0.15
RETREG3-210ENST00000590541 TMEM132CQ8N3T6 1108 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 LINC01560Q8TB33 94 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 PTPMT1Q8WUK0 201 aaPredicted RBP15.97■□□□□ 0.15
RETREG3-210ENST00000590541 LRRC46Q96FV0 321 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 UBXN10Q96LJ8 280 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 TSPYL1Q9H0U9 437 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 NT5DC2Q9H857 520 aa15.97■□□□□ 0.15
RETREG3-210ENST00000590541 BEX4Q9NWD9 120 aaPredicted RBP15.97■□□□□ 0.15
RETREG3-210ENST00000590541 FOXD3Q9UJU5 478 aaPredicted RBP15.97■□□□□ 0.15
RETREG3-210ENST00000590541 MPDZO75970 2070 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 A0A0G2JN53 185 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 A0A1W2PPR1 153 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 CCDC189A1A4V9 331 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 CLDN4O14493 209 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 C1QAP02745 245 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 P04436 131 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 RFPL3SP0C7P2 107 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 CD1DP15813 335 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 PCSK6P29122 969 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 CRABP2P29373 138 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 PIGAP37287 484 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 WNT3P56703 355 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 RAB38P57729 211 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 STXBP1P61764 594 aaKnown RBP15.96■□□□□ 0.15
RETREG3-210ENST00000590541 SLC13A2Q13183 592 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 RBBP5Q15291 538 aaKnown RBP15.96■□□□□ 0.15
RETREG3-210ENST00000590541 WHAMMP3Q1A5X7 153 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 ADGRD1Q6QNK2 874 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 ZDHHC24Q6UX98 284 aa15.96■□□□□ 0.15
RETREG3-210ENST00000590541 CLNKQ7Z7G1 428 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms