RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 LIMK1P53667 647 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 UBASH3AP57075 661 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 IL10RBQ08334 325 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 TNK1Q13470 666 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 BAATQ14032 418 aaPredicted RBP0.3□□□□□ -2.36
COPB1-212ENST00000534771 PCLAFQ15004 111 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 EMC2Q15006 297 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 PPA1Q15181 289 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 LETM2Q2VYF4 491 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 FAM174BQ3ZCQ3 159 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 SUSD4Q5VX71 490 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 PLPP4Q5VZY2 271 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 FAM219BQ5XKK7 198 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 FAM71E1Q6IPT2 247 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 CALHM3Q86XJ0 350 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 CROCCP3Q8IVE0 287 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 SLC43A2Q8N370 569 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 ARRDC1Q8N5I2 433 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 ANKRD13CQ8N6S4 541 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 SLC4A11Q8NBS3 891 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 RNF149Q8NC42 400 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 IL17REQ8NFR9 667 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 CRYGNQ8WXF5 182 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 P2RX5Q93086 422 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 SLC35C1Q96A29 364 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 TMCO6Q96DC7 493 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 SNRNP40Q96DI7 357 aaKnown RBP0.3□□□□□ -2.36
COPB1-212ENST00000534771 OTUB1Q96FW1 271 aaPredicted RBP0.3□□□□□ -2.36
COPB1-212ENST00000534771 ZNF274Q96GC6 653 aaPredicted RBP0.3□□□□□ -2.36
COPB1-212ENST00000534771 ZNF578Q96N58 590 aaPredicted RBP0.3□□□□□ -2.36
COPB1-212ENST00000534771 MUS81Q96NY9 551 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 TEX12Q9BXU0 123 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 UBA5Q9GZZ9 404 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 TNMDQ9H2S6 317 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 RNF41Q9H4P4 317 aaPredicted RBP0.3□□□□□ -2.36
COPB1-212ENST00000534771 SYNCQ9H7C4 482 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 CNOT10Q9H9A5 744 aaKnown RBP0.3□□□□□ -2.36
COPB1-212ENST00000534771 GIMAP4Q9NUV9 329 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 RAI14Q9P0K7 980 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 LEF1Q9UJU2 399 aaPredicted RBP0.3□□□□□ -2.36
COPB1-212ENST00000534771 ZNF221Q9UK13 617 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 ZNF215Q9UL58 517 aaPredicted RBP0.3□□□□□ -2.36
COPB1-212ENST00000534771 ZNF835Q9Y2P0 537 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 SH3GLB1Q9Y371 365 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 PPIAL4AQ9Y536 164 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 FLVCR1Q9Y5Y0 555 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 PARD3Q8TEW0 1356 aa0.3□□□□□ -2.36
COPB1-212ENST00000534771 RAI1Q7Z5J4 1906 aaPredicted RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 IGKV3D-11A0A0A0MRZ8 115 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 A0A1W2PPW3 197 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 FAM166BA8MTA8 275 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 B4E171 279 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 G3V3Y1 287 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 ABCD4O14678 606 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 IMPA2O14732 288 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 PSMD3O43242 534 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 SPRY1O43609 319 aaPredicted RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 RBBP9O75884 186 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 OR6A2O95222 327 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 NUDT14O95848 222 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 C6orf47O95873 294 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 TBX18O95935 607 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 AGR2O95994 175 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 LYNP07948 512 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 ZNF286BP0CG31 522 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 RNASE2P10153 161 aaKnown RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 PNMTP11086 282 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 EEF2P13639 858 aaKnown RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 AZGP1P25311 298 aaKnown RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 CD34P28906 385 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 IL2RGP31785 369 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 UGT1A3P35503 534 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 NUDT1P36639 197 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 TSPAN7P41732 249 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 CRKLP46109 303 aaKnown RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 FHITP49789 147 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 ARHGDIBP52566 201 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 MFAP2P55001 183 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 MTCP1P56278 107 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 ARF3P61204 181 aaPredicted RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 TIMM10P62072 90 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 ARF1P84077 181 aaKnown RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 RBPJQ06330 500 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 DDX10Q13206 875 aaKnown RBP0.29□□□□□ -2.36
COPB1-212ENST00000534771 CEACAM7Q14002 265 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 GIT2Q14161 759 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 SLC17A1Q14916 467 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 NTRK2Q16620 822 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 CHRFAM7AQ494W8 412 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 LINC00483Q53H64 154 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 TSPO2Q5TGU0 170 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 IL34Q6ZMJ4 242 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 C17orf107Q6ZR85 190 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 GPR141Q7Z602 305 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 CAMKMTQ7Z624 323 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 TLK2Q86UE8 772 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 NLRP14Q86W24 1093 aa0.29□□□□□ -2.36
COPB1-212ENST00000534771 LAX1Q8IWV1 398 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms