RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 LMNTD1Q8N9Z9 388 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 ACRBPQ8NEB7 543 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 C7orf57Q8NEG2 295 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 TRIM58Q8NG06 486 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR2L3Q8NG85 312 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR11G2Q8NGC1 345 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR56A1Q8NGH5 318 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 BRIX1Q8TDN6 353 aaKnown RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC25A43Q8WUT9 341 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 ATG4AQ8WYN0 398 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 CCT6BQ92526 530 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 INPP5DQ92835 1189 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZNF503Q96F45 646 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC35A4Q96G79 324 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 VPS39Q96JC1 886 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 CCDC138Q96M89 665 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 IL17FQ96PD4 163 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 EGFL8Q99944 293 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 CENPKQ9BS16 269 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 HAUS8Q9BT25 410 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 VPS11Q9H270 941 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC26A1Q9H2B4 701 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 EXO5Q9H790 373 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZNF703Q9H7S9 590 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 COPS7BQ9H9Q2 264 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 XAB2Q9HCS7 855 aaKnown RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 LZTFL1Q9NQ48 299 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 EIF2B3Q9NR50 452 aaKnown RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 CHRAC1Q9NRG0 131 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 C20orf96Q9NUD7 363 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 INTS10Q9NVR2 710 aaKnown RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 ARL15Q9NXU5 204 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 TAS2R13Q9NYV9 303 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 FAM30AQ9NZY2 134 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 CTSFQ9UBX1 484 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 TAC3Q9UHF0 121 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 ERRFI1Q9UJM3 462 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 NENFQ9UMX5 172 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC45A2Q9UMX9 530 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 PACSIN2Q9UNF0 486 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 ERVK-11Q9UQG0 969 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 ENTPD4Q9Y227 616 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 REXO2Q9Y3B8 237 aaKnown RBP3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 CHST2Q9Y4C5 530 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 CELSR3Q9NYQ7 3312 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 ATMQ13315 3056 aa3.55□□□□□ -1.84
HMGN1P11-201ENST00000508668 COL27A1Q8IZC6 1860 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 FLNCQ14315 2725 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 UQCRHLA0A096LP55 91 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 A0A0A6YYC8 382 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 GRID2IPA4D2P6 1211 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZNF785A8K8V0 405 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 IQCF5A8MTL0 148 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 FOXO6A8MYZ6 492 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 DIRC3C9JPN6 131 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 H0YIG0 161 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 GOLGA8TH3BQL2 631 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 I3L1I5 382 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 CLDN4O14493 209 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 SOCS6O14544 535 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 GAPDHSO14556 408 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 CLGNO14967 610 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 NDUFS4O43181 175 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR1F1O43749 312 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 B3GALT2O43825 422 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 CDC40O60508 579 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC19A2O60779 497 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZG16O60844 167 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLC43A1O75387 559 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 SLCO2B1O94956 709 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 TTC4O95801 387 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 F10P00742 488 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 LDLRP01130 860 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 KRT14P02533 472 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 AHSGP02765 367 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 C8GP07360 202 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 UMODP07911 640 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 CYC1P08574 325 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 PRR35P0CG20 571 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 PRSS56P0CW18 603 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 COX7A2P14406 83 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ZNF24P17028 368 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 OGNP20774 298 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 NR4A1P22736 598 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 RPS3P23396 243 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 GCSHP23434 173 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 MCM3P25205 808 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 HTR1EP28566 365 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 SSTR2P30874 369 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 FOXN2P32314 431 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 CA5AP35218 305 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 XCR1P46094 333 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 CYB561P49447 251 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 TNFSF10P50591 281 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 CCR8P51685 355 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 OR4D2P58180 307 aa3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 PRDX1Q06830 199 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ILF2Q12905 390 aaKnown RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 TBX2Q13207 712 aaPredicted RBP3.54□□□□□ -1.84
HMGN1P11-201ENST00000508668 ART3Q13508 389 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms