RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 RNF14Q9UBS8 474 aa4.89□□□□□ -1.63
SOX2-OT-216ENST00000497122 PILRBQ9UKJ0 227 aa4.89□□□□□ -1.63
SOX2-OT-216ENST00000497122 MAB21L2Q9Y586 359 aa4.89□□□□□ -1.63
SOX2-OT-216ENST00000497122 SMCHD1A6NHR9 2005 aa4.89□□□□□ -1.63
SOX2-OT-216ENST00000497122 TRBV4-1A0A0J9YWV2 114 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ERICH4A6NGS2 130 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 TMEM110-MUSTN1A8MSY1 372 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 H0Y8G0 127 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 CASQ2O14958 399 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 EPHB6O15197 1021 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 CTSVO60911 334 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 UFL1O94874 794 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ANP32DO95626 131 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 GLUD1P00367 558 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 HOXB6P17509 224 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 NCF2P19878 526 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 EFNA1P20827 205 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 FCARP24071 287 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 AXLP30530 894 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 GLUD2P49448 558 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 DVL1P1P54792 670 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 HSPA14Q0VDF9 509 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 TRAF2Q12933 501 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ZBTB17Q13105 803 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 PLD1Q13393 1074 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 EXOSC2Q13868 293 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 PDK3Q15120 406 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ZNF260Q3ZCT1 412 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 HSP90AB3PQ58FF7 597 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ZNF311Q5JNZ3 666 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 CBLN3Q6UW01 205 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 MRPL10Q7Z7H8 261 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ZNF843Q8N446 348 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 DCLK2Q8N568 766 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 RELL2Q8NC24 303 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 SLC37A3Q8NCC5 494 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 AGR3Q8TD06 166 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 RLN3Q8WXF3 142 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 OSTF1Q92882 214 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 TMEM143Q96AN5 459 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 PCED1BQ96HM7 432 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 TPD52L3Q96J77 140 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 COG3Q96JB2 828 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ADGRG7Q96K78 797 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 CNOT6LQ96LI5 555 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ZNF385AQ96PM9 386 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ERGIC2Q96RQ1 377 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 PLIN2Q99541 437 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ZPBPQ9BS86 351 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 CRNKL1Q9BZJ0 848 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 FAM49AQ9H0Q0 323 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 EGLN3Q9H6Z9 239 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 S100A14Q9HCY8 104 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 HACD3Q9P035 362 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 C6orf203Q9P0P8 240 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 EPHA6Q9UF33 1036 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 FAF1Q9UNN5 650 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 PLCL2Q9UPR0 1127 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 OR10H1Q9Y4A9 318 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 ZMYM6O95789 1325 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 PTCH1Q13635 1447 aa4.88□□□□□ -1.63
SOX2-OT-216ENST00000497122 MTMR11A4FU01 709 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 ASPDHA6ND91 283 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 LRRIQ4A6NIV6 560 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 E9PBE3 544 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 MED7O43513 233 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 MT-ND1P03886 318 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 VTNP04004 478 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 F7P08709 466 aaPredicted RBP4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 GSTT2P0CG29 244 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 GSTT2BP0CG30 244 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 HTR2AP28223 471 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 SH3BGRP55822 239 aaPredicted RBP4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 COX10Q12887 443 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 RCN1Q15293 331 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 SF3B4Q15427 424 aaKnown RBP eCLIP4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 OR1C1Q15619 314 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 EXT1Q16394 746 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 CAMK4Q16566 473 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 ZNF528Q3MIS6 628 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 PHYHD1Q5SRE7 291 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 TCEAL6Q6IPX3 200 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 CAPN13Q6MZZ7 669 aaPredicted RBP4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 Q71RC1 249 aaPredicted RBP4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 ANO5Q75V66 913 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 G2E3Q7L622 706 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 EFL1Q7Z2Z2 1120 aaKnown RBP4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 P4HA3Q7Z4N8 544 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 NANOGNBQ7Z5D8 188 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 LHFPL4Q7Z7J7 247 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 SLC22A16Q86VW1 577 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 WDR49Q8IV35 697 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 BBS5Q8N3I7 341 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 NRACQ8N912 160 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 ZNF397Q8NF99 534 aaPredicted RBP4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 WDR36Q8NI36 951 aaKnown RBP4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 NDUFAF3Q9BU61 184 aa4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 RPAP3Q9H6T3 665 aaPredicted RBP4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 KAT8Q9H7Z6 458 aaKnown RBP4.87□□□□□ -1.63
SOX2-OT-216ENST00000497122 VIPAS39Q9H9C1 493 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms