RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ELF5Q9UKW6 265 aaPredicted RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 RABL2BQ9UNT1 228 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 PLA2G4CQ9UP65 541 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 ENTPD4Q9Y227 616 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 PPP2R2CQ9Y2T4 447 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 RRP15Q9Y3B9 282 aaKnown RBP2.05□□□□□ -2.08
LMNB1-207ENST00000494185 UMODL1Q5DID0 1318 aa2.05□□□□□ -2.08
LMNB1-207ENST00000494185 LOC105371242A0A075B767 164 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 A0A087X002 238 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 TRBV5-5A0A0J9YX44 114 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 A0A1B0GU03 582 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 NKX6-3A6NJ46 265 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 ASB14A6NK59 587 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 GPR89AB7ZAQ6 455 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 TRAFD1O14545 582 aaPredicted RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 ZNF195O14628 629 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 FPGTO14772 594 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 CHUKO15111 745 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 SURF4O15260 269 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 CHADO15335 359 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 SYT7O43581 403 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 LRP3O75074 770 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 ZNF821O75541 412 aaPredicted RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 SCGB2A1O75556 95 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 MTRF1O75570 445 aaKnown RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 CEACAM4O75871 244 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 TBX6O95947 436 aaPredicted RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 IGHEP01854 428 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 COL2A1P02458 1487 aaPredicted RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 APRTP07741 180 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 TPM2P07951 284 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 NUDT17P0C025 328 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 GPR89BP0CG08 455 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 THRBP10828 461 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 RALAP11233 206 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 AKT2P31751 481 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 STIP1P31948 543 aaKnown RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 OTX2P32243 289 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 DUTP33316 252 aaKnown RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 SOX6P35712 828 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 ALDH3B1P43353 468 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 PITPNBP48739 271 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 GBX2P52951 348 aaPredicted RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 KCNK10P57789 538 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 GABPB1Q06547 395 aaPredicted RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 ABRQ12979 859 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 GPR50Q13585 617 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 TAB1Q15750 504 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 TMEM41BQ5BJD5 291 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 SPATA46Q5T0L3 261 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 FAM182AQ5T1J6 154 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 IL23RQ5VWK5 629 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 OLFML2AQ68BL7 652 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 ZNF776Q68DI1 518 aaPredicted RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 SLC25A47Q6Q0C1 308 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 CASC1Q6TDU7 716 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 LCLAT1Q6UWP7 414 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 KIF6Q6ZMV9 814 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 ZNF497Q6ZNH5 498 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 RGS9BPQ6ZS82 235 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 C15orf52Q6ZUT6 534 aaKnown RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 SLC24A5Q71RS6 500 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 COX8CQ7Z4L0 72 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 PTAR1Q7Z6K3 402 aaPredicted RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 CROCCP3Q8IVE0 287 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 BCORP1Q8N888 145 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 OR52B4Q8NGK2 314 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 OR4C15Q8NGM1 316 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 ZNF519Q8TB69 540 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 GATAD1Q8WUU5 269 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 APOBEC4Q8WW27 367 aaKnown RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 SHC3Q92529 594 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 PIK3R3Q92569 461 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 SEPT8Q92599 483 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 THRSPQ92748 146 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 GLYATL1Q969I3 302 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 AZIN2Q96A70 460 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 SLC45A3Q96JT2 553 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 S1PR3Q99500 378 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 PYGO2Q9BRQ0 406 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 NTMT1Q9BV86 223 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 TPPP3Q9BW30 176 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 RBM24Q9BX46 236 aaKnown RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 POLR1EQ9GZS1 481 aaKnown RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 GANQ9H2C0 597 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 DPEP3Q9H4B8 488 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 TMEM231Q9H6L2 316 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 VIPAS39Q9H9C1 493 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 RAB9BQ9NP90 201 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 MAN2C1Q9NTJ4 1040 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 TMOD2Q9NZR1 351 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 COX16Q9P0S2 106 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 FAM153AQ9UHL3 310 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 PSORS1C1Q9UIG5 152 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 FBXL4Q9UKA2 621 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 PRDM4Q9UKN5 801 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 MGAT4BQ9UQ53 548 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 NUDCQ9Y266 331 aa2.04□□□□□ -2.08
LMNB1-207ENST00000494185 MRPS7Q9Y2R9 242 aaKnown RBP2.04□□□□□ -2.08
LMNB1-207ENST00000494185 TMED7Q9Y3B3 224 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 668.5 ms