RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TMOD3Q9NYL9 352 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 RPS6KA6Q9UK32 745 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 TRPV2Q9Y5S1 764 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 MAGED1Q9Y5V3 778 aaPredicted RBP1.33□□□□□ -2.2
CCDC93-209ENST00000488908 ARHGAP21Q5T5U3 1957 aa1.33□□□□□ -2.2
CCDC93-209ENST00000488908 IGLV8-61A0A075B6I0 122 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 IGLV4-60A0A075B6I1 120 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 C17orf51A8MQB3 221 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 ZNF732B4DXR9 585 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 TOXO94900 526 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 PGM3O95394 542 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 STARD3NLO95772 234 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 CCDC159P0C7I6 412 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 CCNE1P24864 410 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 RBMXP38159 391 aaKnown RBP1.32□□□□□ -2.2
CCDC93-209ENST00000488908 ID1P41134 155 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 CASP2P42575 452 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 DIO3P55073 304 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 CALD1Q05682 793 aaKnown RBP1.32□□□□□ -2.2
CCDC93-209ENST00000488908 RBPJQ06330 500 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 ORC2Q13416 577 aaPredicted RBP1.32□□□□□ -2.2
CCDC93-209ENST00000488908 PRPF4BQ13523 1007 aaKnown RBP1.32□□□□□ -2.2
CCDC93-209ENST00000488908 FAM174BQ3ZCQ3 159 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 CRY2Q49AN0 593 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 ODF2Q5BJF6 829 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 BMP2KLQ5H9B9 411 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 PAGE2BQ5JRK9 111 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 KPRPQ5T749 579 aaPredicted RBP1.32□□□□□ -2.2
CCDC93-209ENST00000488908 PLPP4Q5VZY2 271 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 CST9LP1Q5W188 147 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 SLC22A10Q63ZE4 541 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 PRPF39Q86UA1 669 aaKnown RBP1.32□□□□□ -2.2
CCDC93-209ENST00000488908 LRP11Q86VZ4 500 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 SPSB1Q96BD6 273 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 EVI5LQ96CN4 794 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 CCSER1Q9C0I3 900 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 FN3KQ9H479 309 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 DPEP3Q9H4B8 488 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 C5orf66Q9H5L9 145 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 MED17Q9NVC6 651 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 MLXQ9UH92 298 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 PSG11Q9UQ72 335 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 EXOC6BQ9Y2D4 811 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 FAM169AQ9Y6X4 670 aa1.32□□□□□ -2.2
CCDC93-209ENST00000488908 RAI1Q7Z5J4 1906 aaPredicted RBP1.32□□□□□ -2.2
CCDC93-209ENST00000488908 CHD4Q14839 1912 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 KIR2DS1A0A191URI9 304 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 A0A1W2PPW3 197 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 P2RX6O15547 441 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 GPX5O75715 221 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 WDHD1O75717 1129 aaPredicted RBP1.31□□□□□ -2.2
CCDC93-209ENST00000488908 STBD1O95210 358 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 CELF2O95319 508 aaKnown RBP1.31□□□□□ -2.2
CCDC93-209ENST00000488908 FHP07954 510 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 SNRPCP09234 159 aaKnown RBP1.31□□□□□ -2.2
CCDC93-209ENST00000488908 SBK2P0C263 348 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 OR52Z1P0C646 297 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 MYBL1P10243 752 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 ACAT1P24752 427 aaKnown RBP1.31□□□□□ -2.2
CCDC93-209ENST00000488908 PSMA3P25788 255 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 HTR1FP30939 366 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 NT5C2P49902 561 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 ZNF45Q02386 682 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 SIM2Q14190 667 aaPredicted RBP1.31□□□□□ -2.2
CCDC93-209ENST00000488908 KIR2DS1Q14954 304 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 MAPRE1Q15691 268 aaKnown RBP1.31□□□□□ -2.2
CCDC93-209ENST00000488908 ERMARDQ5T6L9 678 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 ASPHD2Q6ICH7 369 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 KRT80Q6KB66 452 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 RBPMS2Q6ZRY4 209 aaKnown RBP1.31□□□□□ -2.2
CCDC93-209ENST00000488908 NLRP14Q86W24 1093 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 OR13C5Q8NGS8 318 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 SLC35C1Q96A29 364 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 RMDN2Q96LZ7 410 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 JPH2Q9BR39 696 aaPredicted RBP1.31□□□□□ -2.2
CCDC93-209ENST00000488908 PRODH2Q9UF12 536 aa1.31□□□□□ -2.2
CCDC93-209ENST00000488908 RUVBL2Q9Y230 463 aaKnown RBP1.31□□□□□ -2.2
CCDC93-209ENST00000488908 C2orf92A0A1B0GVN3 265 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 ANKRD63C9JTQ0 380 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 B4GAT1O43505 415 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 SH3BP5O60239 455 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 RTN2O75298 545 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 DUSP11O75319 330 aaKnown RBP1.3□□□□□ -2.2
CCDC93-209ENST00000488908 TADA2AO75478 443 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 GFPT2O94808 682 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 IGLV3-19P01714 112 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 FYNP06241 537 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 LYNP07948 512 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 UGT1A6P19224 532 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 MC5RP33032 325 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 HSPA4P34932 840 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 ARHGDIAP52565 204 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 ZNF131P52739 623 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 HERPUD1Q15011 391 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 SPOUT1Q5T280 376 aaKnown RBP1.3□□□□□ -2.2
CCDC93-209ENST00000488908 CFAP58Q5T655 872 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 PHLDB2Q86SQ0 1253 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 TMEM61Q8N0U2 210 aa1.3□□□□□ -2.2
CCDC93-209ENST00000488908 FBXW8Q8N3Y1 598 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms