RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 PRKG2Q13237 762 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 BOP1Q14137 746 aaKnown RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 TYSND1Q2T9J0 566 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 C15orf59Q2T9L4 293 aaPredicted RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 PGS1Q32NB8 556 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 ZCWPW2Q504Y3 356 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 CCDC181Q5TID7 509 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 ALS2CLQ60I27 953 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 DRICH1Q6PGQ1 229 aaPredicted RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 PAPD4Q6PIY7 484 aaKnown RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 SARM1Q6SZW1 724 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 HOOK3Q86VS8 718 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 GPSM1Q86YR5 675 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 ARHGEF19Q8IW93 802 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 GSPT2Q8IYD1 628 aaKnown RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 NDUFAF2Q8N183 169 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 NPWQ8N729 165 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 PDILTQ8N807 584 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 TTC29Q8NA56 475 aaPredicted RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 NFAM1Q8NET5 270 aaPredicted RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 NEIL3Q8TAT5 605 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 BRSK1Q8TDC3 778 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 METTL21AQ8WXB1 218 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 TAF15Q92804 592 aaKnown RBP eCLIP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 CAVIN3Q969G5 261 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 STARD4Q96DR4 205 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 MVB12AQ96EY5 273 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 RBM41Q96IZ5 413 aaKnown RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 LINC00615Q96LM1 132 aaPredicted RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 SELENOSQ9BQE4 189 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 C11orf70Q9BRQ4 267 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 CCM2Q9BSQ5 444 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 C1QTNF5Q9BXJ0 243 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 OR52A5Q9H2C5 316 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 LDAHQ9H6V9 325 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 MVB12BQ9H7P6 319 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 SYNPO2LQ9H987 977 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 AURKAIP1Q9NWT8 199 aaPredicted RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 OR6C2Q9NZP2 312 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 SH2B3Q9UQQ2 575 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 CHKBQ9Y259 395 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 TCAF1Q9Y4C2 921 aa4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.71□□□□□ -1.66
SBDSP1-204ENST00000453858 ALMS1Q8TCU4 4167 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 MUC4Q99102 2169 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 OR2AG2A6NM03 316 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 G3V3Y1 287 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 C16orf97H3BN30 126 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 M0QZ24 198 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 PMM2O15305 246 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 FRS3O43559 492 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 CALUO43852 315 aaPredicted RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 STX10O60499 249 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 POLBP06746 335 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 NUDT17P0C025 328 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 SLC35G4P0C7Q5 338 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 APEHP13798 732 aaKnown RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 ALOX15P16050 662 aaPredicted RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 TPSB2P20231 275 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 DDCP20711 480 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 RFC1P35251 1148 aaPredicted RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 MSX2P35548 267 aaPredicted RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 CD86P42081 329 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 KRTAP10-3P60369 221 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 CTXN1P60606 82 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 RPL26P61254 145 aaKnown RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 CUL4BQ13620 913 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 KRT33BQ14525 404 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 KIR2DS3Q14952 304 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 MLC1Q15049 377 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 ZNHIT3Q15649 155 aaPredicted RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 TPSAB1Q15661 275 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 ZSWIM7Q19AV6 140 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 GFOD2Q3B7J2 385 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 SFT2D3Q587I9 215 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 XKR6Q5GH73 641 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 DCAF17Q5H9S7 520 aaPredicted RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 C11orf71Q6IPW1 123 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 SUSD1Q6UWL2 747 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 PCGF5Q86SE9 256 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 CFAP206Q8IYR0 622 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 SVOPLQ8N434 492 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 ZFP28Q8NHY6 868 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 SLC35G2Q8TBE7 412 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 FAM71BQ8TC56 605 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 Q8TCH9 128 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 ST8SIA2Q92186 375 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 GTF3AQ92664 365 aaKnown RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 C20orf173Q96LM9 149 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 CCT8L2Q96SF2 557 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 FAM173AQ9BQD7 235 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 SCAND2PQ9GZW5 306 aaPredicted RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 BLZF1Q9H2G9 400 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 CDC42EP4Q9H3Q1 356 aaKnown RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 UGT1A8Q9HAW9 530 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 TUBA8Q9NY65 449 aaPredicted RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 PACSIN3Q9UKS6 424 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 CDC14AQ9UNH5 594 aa4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 RPL26L1Q9UNX3 145 aaKnown RBP4.7□□□□□ -1.66
SBDSP1-204ENST00000453858 KLK4Q9Y5K2 254 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms