RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 GALR3O60755 368 aaPredicted RBP20.85■□□□□ 0.93
VSX1-205ENST00000429762 PRKD3O94806 890 aa20.85■□□□□ 0.93
VSX1-205ENST00000429762 GABRA4P48169 554 aa20.85■□□□□ 0.93
VSX1-205ENST00000429762 SHC2P98077 582 aa20.85■□□□□ 0.93
VSX1-205ENST00000429762 GUSBP11Q6P575 273 aa20.85■□□□□ 0.93
VSX1-205ENST00000429762 ERMP1Q7Z2K6 904 aa20.85■□□□□ 0.93
VSX1-205ENST00000429762 ARHGEF39Q8N4T4 335 aa20.85■□□□□ 0.93
VSX1-205ENST00000429762 TMEM52Q8NDY8 209 aa20.85■□□□□ 0.93
VSX1-205ENST00000429762 DNAJC9Q8WXX5 260 aa20.85■□□□□ 0.93
VSX1-205ENST00000429762 C10orf90Q96M02 699 aa20.85■□□□□ 0.93
VSX1-205ENST00000429762 ACSS1Q9NUB1 689 aaPredicted RBP20.85■□□□□ 0.93
VSX1-205ENST00000429762 PHF11Q9UIL8 331 aa20.85■□□□□ 0.93
VSX1-205ENST00000429762 FAF1Q9UNN5 650 aaPredicted RBP20.85■□□□□ 0.93
VSX1-205ENST00000429762 MYO1GB0I1T2 1018 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 FAM227AF5H4B4 570 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 DUX1O43812 170 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 CD1CP29017 333 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 BUD31P41223 144 aaPredicted RBP20.84■□□□□ 0.93
VSX1-205ENST00000429762 TP53BP2Q13625 1128 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 SPIDRQ14159 915 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 TAF11Q15544 211 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 LTB4RQ15722 352 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 PRTGQ2VWP7 1150 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 TRIM61Q5EBN2 209 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 GCNT6Q5T4J0 391 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 TNFAIP8L2Q6P589 184 aaPredicted RBP20.84■□□□□ 0.93
VSX1-205ENST00000429762 METTL27Q8N6F8 245 aaPredicted RBP20.84■□□□□ 0.93
VSX1-205ENST00000429762 NATD1Q8N6N6 113 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 GOLM1Q8NBJ4 401 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 ICA1LQ8NDH6 482 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 KLHL4Q9C0H6 718 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 ANKRA2Q9H9E1 313 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 ZSCAN32Q9NX65 697 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 EPHA6Q9UF33 1036 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 GMEB1Q9Y692 573 aa20.84■□□□□ 0.93
VSX1-205ENST00000429762 A0A0A6YYC8 382 aaPredicted RBP20.83■□□□□ 0.93
VSX1-205ENST00000429762 LY6G6EA0A0G2JKS1 128 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 I3L1I5 382 aaPredicted RBP20.83■□□□□ 0.93
VSX1-205ENST00000429762 AGRPO00253 132 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 TNFRSF21O75509 655 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 ZNF10P21506 573 aaPredicted RBP20.83■□□□□ 0.93
VSX1-205ENST00000429762 SAXO2Q658L1 398 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 ERICH5Q6P6B1 374 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 CA13Q8N1Q1 262 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 EID2Q8N6I1 236 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 OR9A2Q8NGT5 310 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 DOK4Q8TEW6 326 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 NUDT22Q9BRQ3 303 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 CHID1Q9BWS9 393 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 RBCK1Q9BYM8 510 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 SPRTNQ9H040 489 aaPredicted RBP20.83■□□□□ 0.93
VSX1-205ENST00000429762 CAPN10Q9HC96 672 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 NEUROD4Q9HD90 331 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 PDE7BQ9NP56 450 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 DCAF13Q9NV06 445 aaKnown RBP20.83■□□□□ 0.93
VSX1-205ENST00000429762 GMEB2Q9UKD1 530 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 U3KQA8 63 aa20.83■□□□□ 0.93
VSX1-205ENST00000429762 KRT75O95678 551 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 ZNF682O95780 498 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 UMPSP11172 480 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 CCT3P49368 545 aaKnown RBP20.83■□□□□ 0.92
VSX1-205ENST00000429762 AQP4P55087 323 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 ANGPT1Q15389 498 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 MANEAQ5SRI9 462 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 PERM1Q5SV97 790 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 TMEM107Q6UX40 140 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 C6orf120Q7Z4R8 191 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 HORMAD2Q8N7B1 307 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 OR4C6Q8NH72 309 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 NFKBIDQ8NI38 313 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 NEURL3Q96EH8 262 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 SLC47A1Q96FL8 570 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 OTUB1Q96FW1 271 aaPredicted RBP20.83■□□□□ 0.92
VSX1-205ENST00000429762 ZNF681Q96N22 645 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 RAB33BQ9H082 229 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 ATXN7L1Q9ULK2 861 aaPredicted RBP20.83■□□□□ 0.92
VSX1-205ENST00000429762 PLCL2Q9UPR0 1127 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 DTNAQ9Y4J8 743 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 SLC22A7Q9Y694 548 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 SPEGQ15772 3267 aa20.83■□□□□ 0.92
VSX1-205ENST00000429762 HNRNPRO43390 633 aaKnown RBP20.82■□□□□ 0.92
VSX1-205ENST00000429762 CSNK2A2P19784 350 aaPredicted RBP20.82■□□□□ 0.92
VSX1-205ENST00000429762 SPRED1Q7Z699 444 aa20.82■□□□□ 0.92
VSX1-205ENST00000429762 ADCY4Q8NFM4 1077 aa20.82■□□□□ 0.92
VSX1-205ENST00000429762 RNF31Q96EP0 1072 aa20.82■□□□□ 0.92
VSX1-205ENST00000429762 GTPBP2Q9BX10 602 aaKnown RBP20.82■□□□□ 0.92
VSX1-205ENST00000429762 ANKHQ9HCJ1 492 aa20.82■□□□□ 0.92
VSX1-205ENST00000429762 HCN3Q9P1Z3 774 aa20.82■□□□□ 0.92
VSX1-205ENST00000429762 ZNF780BQ9Y6R6 833 aa20.82■□□□□ 0.92
VSX1-205ENST00000429762 UNC13CQ8NB66 2214 aa20.82■□□□□ 0.92
VSX1-205ENST00000429762 SAC3D1A6NKF1 404 aa20.81■□□□□ 0.92
VSX1-205ENST00000429762 ZBTB11O95625 1053 aaPredicted RBP20.81■□□□□ 0.92
VSX1-205ENST00000429762 RETP07949 1114 aa20.81■□□□□ 0.92
VSX1-205ENST00000429762 PRKAG1P54619 331 aa20.81■□□□□ 0.92
VSX1-205ENST00000429762 MAP7Q14244 749 aa20.81■□□□□ 0.92
VSX1-205ENST00000429762 MLC1Q15049 377 aa20.81■□□□□ 0.92
VSX1-205ENST00000429762 NR0B2Q15466 257 aa20.81■□□□□ 0.92
VSX1-205ENST00000429762 GPR19Q15760 415 aa20.81■□□□□ 0.92
VSX1-205ENST00000429762 IRAK1BP1Q5VVH5 260 aa20.81■□□□□ 0.92
VSX1-205ENST00000429762 PRR23CQ6ZRP0 262 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms