RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ARF1P84077 181 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CDR2Q01850 454 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 MYL5Q02045 173 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 RUNX1T1Q06455 604 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SULT2A1Q06520 285 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CDH18Q13634 790 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 HNRNPDQ14103 355 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 STX1AQ16623 288 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 HNRNPA1L2Q32P51 320 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 PCGF3Q3KNV8 242 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC25A52Q3SY17 297 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 RABGAP1LQ5R372 815 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CCDC183Q5T5S1 534 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 LYSMD4Q5XG99 296 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ACSM2BQ68CK6 577 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR6B2Q6IFH4 312 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR7E24Q6IFN5 339 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 FBXL22Q6P050 247 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 RFWD3Q6PCD5 774 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SASS6Q6UVJ0 657 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 RAD9BQ6WBX8 426 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF704Q6ZNC4 412 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 Q6ZTC4 211 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 FAM183BPQ6ZVS7 135 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 APTXQ7Z2E3 356 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ERICH1Q86X53 443 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 TICAM1Q8IUC6 712 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CREBRFQ8IUR6 639 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 MFN1Q8IWA4 741 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF683Q8IZ20 524 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 CCAR2Q8N163 923 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 RASGEF1CQ8N431 466 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 METTL27Q8N6F8 245 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 EMC1Q8N766 993 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC38A9Q8NBW4 561 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 MSANTD4Q8NCY6 345 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ANKRD20A12PQ8NF67 263 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 WFDC5Q8TCV5 224 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 UTP15Q8TED0 518 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 TRPC4APQ8TEL6 797 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC38A5Q8WUX1 472 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 RLN3Q8WXF3 142 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 FAM131CQ96AQ9 280 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ALG14Q96F25 216 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SMC6Q96SB8 1091 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 EPYCQ99645 322 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SEMA3CQ99985 751 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 NEURL2Q9BR09 285 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 LRRC1Q9BTT6 524 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 EDEM2Q9BV94 578 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 RSPH9Q9H1X1 276 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 HSD3B7Q9H2F3 369 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 LRMDAQ9H2I8 198 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SGK2Q9HBY8 427 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMEM9BQ9NQ34 198 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 PRSS16Q9NQE7 514 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 PIGVQ9NUD9 493 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 DDIT4Q9NX09 232 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ARHGEF38Q9NXL2 777 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 NOCTQ9UK39 431 aaKnown RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 STAP1Q9ULZ2 295 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ERVW-1Q9UQF0 538 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR51B4Q9Y5P0 310 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 SESN1Q9Y6P5 492 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ANKRD11Q6UB99 2663 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 IGF2RP11717 2491 aa3.41□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZFC3H1O60293 1989 aaKnown RBP3.4□□□□□ -1.86
CKS1BP3-201ENST00000600888 A0A087WYN8 130 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 EDDM13A0A1B0GTR0 161 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CTAGE9A4FU28 777 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 H0Y626 953 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 MAP2K7O14733 419 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 SMAD9O15198 467 aaKnown RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 ALOX15BO15296 676 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 OGG1O15527 345 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 SLC7A4O43246 635 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 HS6ST1O60243 411 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 RNASEH1O60930 286 aaKnown RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 GPC4O75487 556 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 MOCS2O96007 188 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 DNTTP04053 509 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 UMODP07911 640 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CCDC172P0C7W6 258 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF883P0CG24 379 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CTAGE8P0CG41 777 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 PNMA6AP0CW24 399 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 HLA-EP13747 358 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 GNSP15586 552 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 NUDT1P36639 197 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 NNMTP40261 264 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 MSH2P43246 934 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 ARCN1P48444 511 aaKnown RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CAMPP49913 170 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 TERF1P54274 439 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 CDH4P55283 916 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 GEMIN4P57678 1058 aaKnown RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 POLR2FP61218 127 aaKnown RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 ST8SIA6P61647 398 aa3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 RPS14P62263 151 aaKnown RBP3.4□□□□□ -1.87
CKS1BP3-201ENST00000600888 PLIN5Q00G26 463 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms