RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 PSKH1P11801 424 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 MYL12AP19105 171 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 MAPK8P45983 427 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 HBA1P69905 142 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 HSPA14Q0VDF9 509 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 PLEKHS1Q5SXH7 462 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 ZNF852Q6ZMS4 543 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 ZNF730Q6ZMV8 503 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 USP30Q70CQ3 517 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 ATP6V1C2Q8NEY4 427 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 DNAJA4Q8WW22 397 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-205ENST00000539661 HYLS1Q96M11 299 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 SLC6A18Q96N87 628 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 PPP1R3EQ9H7J1 279 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 HCN2Q9UL51 889 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 IGLV3-16A0A075B6K0 115 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 LEUTXA8MZ59 168 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 SMAD6O43541 496 aaKnown RBP16.79■□□□□ 0.28
RAB40C-205ENST00000539661 ORC5O43913 435 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 CLEC2LP0C7M8 214 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 ARAFP10398 606 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 GSTM5P46439 218 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 DDX39BQ13838 428 aaKnown RBP16.79■□□□□ 0.28
RAB40C-205ENST00000539661 PLK5Q496M5 336 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 C22orf42Q6IC83 251 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 ZNF782Q6ZMW2 699 aaPredicted RBP16.79■□□□□ 0.28
RAB40C-205ENST00000539661 MAP6Q96JE9 813 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 ISYNA1Q9NPH2 558 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 MRPL39Q9NYK5 338 aaKnown RBP16.79■□□□□ 0.28
RAB40C-205ENST00000539661 NOD1Q9Y239 953 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 AKR7A2O43488 359 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 GJB5O95377 273 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 VNN2O95498 520 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 TIA1P31483 386 aaKnown RBP eCLIP16.79■□□□□ 0.28
RAB40C-205ENST00000539661 STK19P49842 368 aaPredicted RBP16.79■□□□□ 0.28
RAB40C-205ENST00000539661 WDR5P61964 334 aaKnown RBP16.79■□□□□ 0.28
RAB40C-205ENST00000539661 B4GALNT1Q00973 533 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 RIN1Q13671 783 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 DOC2AQ14183 400 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 SF1Q15637 639 aaKnown RBP16.79■□□□□ 0.28
RAB40C-205ENST00000539661 SLC25A30Q5SVS4 291 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 REM2Q8IYK8 340 aaPredicted RBP16.79■□□□□ 0.28
RAB40C-205ENST00000539661 PLA2G15Q8NCC3 412 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 TMEM163Q8TC26 289 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 KATNB1Q9BVA0 655 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 ATG10Q9H0Y0 220 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 REEP4Q9H6H4 257 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 SPEF1Q9Y4P9 236 aa16.79■□□□□ 0.28
RAB40C-205ENST00000539661 FAM240BA0A1B0GVZ2 78 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 RAB36O95755 333 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 EOMESO95936 686 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 MAN2A2P49641 1150 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 MRPL28Q13084 256 aaKnown RBP16.78■□□□□ 0.28
RAB40C-205ENST00000539661 HEPACAMQ14CZ8 416 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 WSCD2Q2TBF2 565 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 GPR65Q8IYL9 337 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 UBE2J2Q8N2K1 259 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 Q8N402 240 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 ZNF557Q8N988 423 aaPredicted RBP16.78■□□□□ 0.28
RAB40C-205ENST00000539661 GPR26Q8NDV2 337 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 C2orf15Q8WU43 125 aaKnown RBP16.78■□□□□ 0.28
RAB40C-205ENST00000539661 OVCA2Q8WZ82 227 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 CLP1Q92989 425 aaKnown RBP16.78■□□□□ 0.28
RAB40C-205ENST00000539661 LYSMD1Q96S90 227 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 RC3H2Q9HBD1 1191 aaKnown RBP16.78■□□□□ 0.28
RAB40C-205ENST00000539661 NUP50Q9UKX7 468 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 PRELID1Q9Y255 219 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 HSPB11Q9Y547 144 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 LYRM1O43325 122 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 UBL4AP11441 157 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 PRKACBP22694 351 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 CSNK1DP48730 415 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 SF3A2Q15428 464 aaKnown RBP16.78■□□□□ 0.28
RAB40C-205ENST00000539661 FAM214AQ32MH5 1076 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 HECTD3Q5T447 861 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 ANKS3Q6ZW76 656 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 LAPTM4BQ86VI4 370 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 THOC6Q86W42 341 aaKnown RBP16.78■□□□□ 0.28
RAB40C-205ENST00000539661 AMIGO1Q86WK6 493 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 TMC8Q8IU68 726 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 ZBED6CLQ96FA7 236 aaPredicted RBP16.78■□□□□ 0.28
RAB40C-205ENST00000539661 SGK2Q9HBY8 427 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 GULP1Q9UBP9 304 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 OR51B4Q9Y5P0 310 aa16.78■□□□□ 0.28
RAB40C-205ENST00000539661 PLXNB3Q9ULL4 1909 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 GNG14A0A1W2PPG7 69 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 KPNA5O15131 536 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 RECKO95980 971 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 GSTM1P09488 218 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 RPL3P39023 403 aaKnown RBP16.77■□□□□ 0.28
RAB40C-205ENST00000539661 XKP51811 444 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 IKZF1Q13422 519 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 CYP27C1Q4G0S4 372 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 CDONQ4KMG0 1287 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 ZNF385BQ569K4 471 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 RASGRP3Q8IV61 690 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 FAM26EQ8N5C1 309 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 QRFPRQ96P65 431 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 TM6SF2Q9BZW4 377 aa16.77■□□□□ 0.28
RAB40C-205ENST00000539661 EXO1Q9UQ84 846 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms