RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 PRPH2P23942 346 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 EMP2P54851 167 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 HMGCS1Q01581 520 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 RHAGQ02094 409 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 SLAMF1Q13291 335 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 TMEM205Q6UW68 189 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 PPP1R32Q7Z5V6 425 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 NUDT13Q86X67 352 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 TRIM42Q8IWZ5 723 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 ZNF781Q8N8C0 355 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 FDCSPQ8NFU4 85 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 SSC4DQ8WTU2 575 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 ZNF75CPQ92670 426 aaPredicted RBP17.05■□□□□ 0.32
VEGFA-222ENST00000520948 VN1R1Q9GZP7 353 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 ILKAPQ9H0C8 392 aaPredicted RBP17.05■□□□□ 0.32
VEGFA-222ENST00000520948 PRM3Q9NNZ6 103 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 THAP1Q9NVV9 213 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 MAP10Q9P2G4 905 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 C3orf18Q9UK00 162 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 MKL2Q9ULH7 1088 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 CLDN16Q9Y5I7 305 aa17.05■□□□□ 0.32
VEGFA-222ENST00000520948 SCN2AQ99250 2005 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 A1L4Q6 167 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 OR2W5A6NFC9 320 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 SLC28A1O00337 649 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 SOCS6O14544 535 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 PROM1O43490 865 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 HNRNPH2P55795 449 aaKnown RBP17.04■□□□□ 0.32
VEGFA-222ENST00000520948 RAE1P78406 368 aaKnown RBP17.04■□□□□ 0.32
VEGFA-222ENST00000520948 OCRLQ01968 901 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 RAPSNQ13702 412 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 KIAA0040Q15053 153 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 INPP5JQ15735 1006 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-222ENST00000520948 ATG16L1Q676U5 607 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 JMJD6Q6NYC1 403 aaPredicted RBP17.04■□□□□ 0.32
VEGFA-222ENST00000520948 GALNT18Q6P9A2 607 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 PAGE2Q7Z2X7 111 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 COMMD6Q7Z4G1 85 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 PRSS58Q8IYP2 241 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 C1orf52Q8N6N3 182 aaKnown RBP17.04■□□□□ 0.32
VEGFA-222ENST00000520948 TMEM52Q8NDY8 209 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 OR2T11Q8NH01 316 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 ADAMTS18Q8TE60 1221 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 TWIST2Q8WVJ9 160 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 APIPQ96GX9 242 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 CRB3Q9BUF7 120 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 NUDT9Q9BW91 350 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 MED4Q9NPJ6 270 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 FIS1Q9Y3D6 152 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 ZNF451Q9Y4E5 1061 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 ATG4BQ9Y4P1 393 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 PTGDR2Q9Y5Y4 395 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 HS3ST3B1Q9Y662 390 aa17.04■□□□□ 0.32
VEGFA-222ENST00000520948 TEX15Q9BXT5 2789 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 A0A1W2PQ72 361 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 PCDH17O14917 1159 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 CEACAM4O75871 244 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 RSL1D1O76021 490 aaKnown RBP17.03■□□□□ 0.32
VEGFA-222ENST00000520948 CHEK2O96017 543 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 GBAP04062 536 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 KLK1P06870 262 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 HEXBP07686 556 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 FAM58BPP0C7Q3 252 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 LINC00032P0C843 101 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 JAK1P23458 1154 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 RPL14P50914 215 aaKnown RBP17.03■□□□□ 0.32
VEGFA-222ENST00000520948 HNRNPFP52597 415 aaKnown RBP17.03■□□□□ 0.32
VEGFA-222ENST00000520948 BTG2P78543 158 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 MRPL49Q13405 166 aaKnown RBP17.03■□□□□ 0.32
VEGFA-222ENST00000520948 XKR7Q5GH72 579 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 QSOX2Q6ZRP7 698 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 GPR180Q86V85 440 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 RAB43Q86YS6 212 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 SCUBE1Q8IWY4 988 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 Q8NA96 180 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 AGR3Q8TD06 166 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 METTL2AQ96IZ6 378 aaKnown RBP17.03■□□□□ 0.32
VEGFA-222ENST00000520948 IP6K3Q96PC2 410 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 CSF3RQ99062 836 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 MESP1Q9BRJ9 268 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 SLAMF7Q9NQ25 335 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 INTS9Q9NV88 658 aaKnown RBP17.03■□□□□ 0.32
VEGFA-222ENST00000520948 LYARQ9NX58 379 aaKnown RBP17.03■□□□□ 0.32
VEGFA-222ENST00000520948 MS4A12Q9NXJ0 267 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 FBXW2Q9UKT8 454 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 ESPL1Q14674 2120 aa17.03■□□□□ 0.32
VEGFA-222ENST00000520948 LOC102723996A0A087X1L8 192 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 IGKV3D-11A0A0A0MRZ8 115 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 A0A1W2PR48 441 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 TCP11X1B4DZS4 312 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 PIP5K1BO14986 540 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 B4GALT2O60909 372 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 ALOX12BO75342 701 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 HSD17B7P56937 341 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 ATP1A4Q13733 1029 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 EIF2S3LQ2VIR3 472 aaKnown RBP17.02■□□□□ 0.32
VEGFA-222ENST00000520948 SPIN4Q56A73 249 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 CCNYL2Q5T2Q4 361 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 SLC6A19Q695T7 634 aa17.02■□□□□ 0.32
VEGFA-222ENST00000520948 KIRREL2Q6UWL6 708 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms