RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 MESP1Q9BRJ9 268 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 FAIM2Q9BWQ8 316 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 ADAP2Q9NPF8 381 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 MCM8Q9UJA3 840 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 TP53TG5Q9Y2B4 290 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 TRAF6Q9Y4K3 522 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 ATG4BQ9Y4P1 393 aa14.07□□□□□ -0.16
RNF4-210ENST00000508235 DSPP15924 2871 aaKnown RBP14.06□□□□□ -0.16
RNF4-210ENST00000508235 IGHV3-20A0A0C4DH32 117 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 A0A1W2PR48 441 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 RSL1D1O76021 490 aaKnown RBP14.06□□□□□ -0.16
RNF4-210ENST00000508235 MYO1DO94832 1006 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 SEC24DO94855 1032 aaPredicted RBP14.06□□□□□ -0.16
RNF4-210ENST00000508235 GBAP04062 536 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 IFNA16P05015 189 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 HNRNPFP52597 415 aaKnown RBP14.06□□□□□ -0.16
RNF4-210ENST00000508235 ABCE1P61221 599 aaKnown RBP14.06□□□□□ -0.16
RNF4-210ENST00000508235 HMGCS1Q01581 520 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 SOWAHCQ53LP3 525 aaPredicted RBP14.06□□□□□ -0.16
RNF4-210ENST00000508235 SH2D4BQ5SQS7 431 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 OR52E8Q6IFG1 317 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 ASB18Q6ZVZ8 466 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 CLNKQ7Z7G1 428 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 TRIM42Q8IWZ5 723 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 TMEM52Q8NDY8 209 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 FAM76AQ8TAV0 307 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 CCT7Q99832 543 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 SH3GL2Q99962 352 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 WDR77Q9BQA1 342 aaPredicted RBP14.06□□□□□ -0.16
RNF4-210ENST00000508235 PELOQ9BRX2 385 aaKnown RBP14.06□□□□□ -0.16
RNF4-210ENST00000508235 NUDT9Q9BW91 350 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 ALOXE3Q9BYJ1 711 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 PNO1Q9NRX1 252 aaKnown RBP14.06□□□□□ -0.16
RNF4-210ENST00000508235 SIRT5Q9NXA8 310 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.06□□□□□ -0.16
RNF4-210ENST00000508235 FIS1Q9Y3D6 152 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 DNAJC15Q9Y5T4 150 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 DOCK10Q96BY6 2186 aa14.06□□□□□ -0.16
RNF4-210ENST00000508235 GNG14A0A1W2PPG7 69 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 SAGE2PA6NJ88 616 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 HMGB1P1B2RPK0 211 aaPredicted RBP14.05□□□□□ -0.16
RNF4-210ENST00000508235 PCDH7O60245 1069 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 UQCRHP07919 91 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 COX7A2P14406 83 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 CHN1P15882 459 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 PRPH2P23942 346 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 SERPINB3P29508 390 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 SLC26A5P58743 744 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 Q0VFX4 171 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 STX3Q13277 289 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 ELAVL1Q15717 326 aaKnown RBP14.05□□□□□ -0.16
RNF4-210ENST00000508235 CRB2Q5IJ48 1285 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 NDUFAF5Q5TEU4 345 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 C18orf63Q68DL7 685 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 GALNT18Q6P9A2 607 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 SCIMPQ6UWF3 145 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 TMEM132CQ8N3T6 1108 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 RAB3IL1Q8TBN0 382 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 TWIST2Q8WVJ9 160 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 DAZLQ92904 295 aaKnown RBP14.05□□□□□ -0.16
RNF4-210ENST00000508235 APIPQ96GX9 242 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 BBC3Q96PG8 261 aaPredicted RBP14.05□□□□□ -0.16
RNF4-210ENST00000508235 ILKAPQ9H0C8 392 aaPredicted RBP14.05□□□□□ -0.16
RNF4-210ENST00000508235 ZNF552Q9H707 407 aaPredicted RBP14.05□□□□□ -0.16
RNF4-210ENST00000508235 TNFRSF12AQ9NP84 129 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 MMP25Q9NPA2 562 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 ZNF71Q9NQZ8 489 aaPredicted RBP14.05□□□□□ -0.16
RNF4-210ENST00000508235 VTI1BQ9UEU0 232 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 TEKT2Q9UIF3 430 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 PSME2Q9UL46 239 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 CLCA3PQ9Y6N3 262 aa14.05□□□□□ -0.16
RNF4-210ENST00000508235 C1orf226A1L170 272 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 NPIPB8E9PQR5 432 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 MASP2O00187 686 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 DYRK3O43781 588 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 DPM1O60762 260 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 LDB3O75112 727 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 AIFM1O95831 613 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 PIK3R1P27986 724 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 TIA1P31483 386 aaKnown RBP eCLIP14.04□□□□□ -0.16
RNF4-210ENST00000508235 SLC1A6P48664 564 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 TAS2R50P59544 299 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 IGLV3-21P80748 117 aaPredicted RBP14.04□□□□□ -0.16
RNF4-210ENST00000508235 PLIN5Q00G26 463 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 FOLH1Q04609 750 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 BTKQ06187 659 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 RAPSNQ13702 412 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 ATG16L1Q676U5 607 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 ISLR2Q6UXK2 745 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 DDIASQ8IXT1 998 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 AGR3Q8TD06 166 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 MGARPQ8TDB4 240 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 ANKRD9Q96BM1 317 aaPredicted RBP14.04□□□□□ -0.16
RNF4-210ENST00000508235 ARL8AQ96BM9 186 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 RBM18Q96H35 190 aaKnown RBP14.04□□□□□ -0.16
RNF4-210ENST00000508235 DGAT2Q96PD7 388 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 LMF1Q96S06 567 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 EPS8L2Q9H6S3 715 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 KCNK13Q9HB14 408 aa14.04□□□□□ -0.16
RNF4-210ENST00000508235 C1orf109Q9NX04 203 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms