RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 SOX8P57073 446 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 WDR4P57081 412 aaKnown RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 RAE1P78406 368 aaKnown RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 MYBPC3Q14896 1274 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 IMPG1Q17R60 797 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 BTBD16Q32M84 506 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 TTMPQ5BVD1 217 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 SH2D4BQ5SQS7 431 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 CCNYL2Q5T2Q4 361 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 HHATQ5VTY9 493 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 KANK2Q63ZY3 851 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 TCTN3Q6NUS6 607 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 PTRH1Q86Y79 214 aaKnown RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 OR4N5Q8IXE1 308 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 SIRT6Q8N6T7 355 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 BRIX1Q8TDN6 353 aaKnown RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 CHTF18Q8WVB6 975 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 APIPQ96GX9 242 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 IMMP1LQ96LU5 166 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 LPAR4Q99677 370 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 LHPPQ9H008 270 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 ZNF552Q9H707 407 aaPredicted RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 RPF2Q9H7B2 306 aaKnown RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 ZNF395Q9H8N7 513 aaPredicted RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 EML4Q9HC35 981 aaKnown RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 PNO1Q9NRX1 252 aaKnown RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 MS4A12Q9NXJ0 267 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 ADAM29Q9UKF5 820 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 PCDHGA9Q9Y5G4 932 aaKnown RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 SERTM1A2A2V5 107 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 EIF4E1BA6NMX2 242 aaKnown RBP12.72□□□□□ -0.37
FDPS-219ENST00000495308 ITM2AO43736 263 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 PCDH7O60245 1069 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 FGF17O60258 216 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 CTNSO60931 367 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 C1QL1O75973 258 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 SASH3O75995 380 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 SERPINA7P05543 415 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 SFTPCP11686 197 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 NEFHP12036 1026 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 TLX1P31314 330 aaPredicted RBP12.72□□□□□ -0.37
FDPS-219ENST00000495308 SERPINB5P36952 375 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 MAPK12P53778 367 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 FOLH1Q04609 750 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 ZNF33BQ06732 778 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 STX4Q12846 297 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 NFATC3Q12968 1075 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 COLEC12Q5KU26 742 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 SPDYAQ5MJ70 313 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 IRAK1BP1Q5VVH5 260 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 RIPOR1Q6ZS17 1223 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 ASB18Q6ZVZ8 466 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 MMP21Q8N119 569 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 ANKRD9Q96BM1 317 aaPredicted RBP12.72□□□□□ -0.37
FDPS-219ENST00000495308 EBPLQ9BY08 206 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 TUBB1Q9H4B7 451 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 VIPAS39Q9H9C1 493 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 ZBTB20Q9HC78 741 aaPredicted RBP12.72□□□□□ -0.37
FDPS-219ENST00000495308 ZDHHC2Q9UIJ5 367 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 G3BP2Q9UN86 482 aaKnown RBP12.72□□□□□ -0.37
FDPS-219ENST00000495308 TRAF6Q9Y4K3 522 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 COL6A6A6NMZ7 2263 aa12.72□□□□□ -0.37
FDPS-219ENST00000495308 UQCRHLA0A096LP55 91 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 BLACEA4D250 179 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 SAGE2PA6NJ88 616 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 PGRMC2O15173 223 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 MYO1DO94832 1006 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 HSPA4LO95757 839 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 IFNA16P05015 189 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 SERPINE1P05121 402 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 UQCRHP07919 91 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 LINC00032P0C843 101 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 TIA1P31483 386 aaKnown RBP eCLIP12.71□□□□□ -0.37
FDPS-219ENST00000495308 SLC26A5P58743 744 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 ACSM2AQ08AH3 577 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 SPIN4Q56A73 249 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 VWA5B1Q5TIE3 1220 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 ACSM2BQ68CK6 577 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 PLAG1Q6DJT9 500 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 TRIM46Q7Z4K8 759 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 DDIASQ8IXT1 998 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 TWIST2Q8WVJ9 160 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 PSMF1Q92530 271 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 ATP6V1G3Q96LB4 118 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 SMAD5Q99717 465 aaKnown RBP12.71□□□□□ -0.37
FDPS-219ENST00000495308 SH3GL2Q99962 352 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 ALOXE3Q9BYJ1 711 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 C20orf27Q9GZN8 174 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 WDR41Q9HAD4 459 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 PTGFRNQ9P2B2 879 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 MCM8Q9UJA3 840 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 CCL27Q9Y4X3 112 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 DNAJC15Q9Y5T4 150 aa12.71□□□□□ -0.37
FDPS-219ENST00000495308 SPTA1P02549 2419 aa12.7□□□□□ -0.38
FDPS-219ENST00000495308 GNG14A0A1W2PPG7 69 aa12.7□□□□□ -0.38
FDPS-219ENST00000495308 A0A1W2PS29 197 aa12.7□□□□□ -0.38
FDPS-219ENST00000495308 TMEM114B3SHH9 223 aa12.7□□□□□ -0.38
FDPS-219ENST00000495308 PIP5K1BO14986 540 aa12.7□□□□□ -0.38
FDPS-219ENST00000495308 SKAP2O75563 359 aaPredicted RBP12.7□□□□□ -0.38
FDPS-219ENST00000495308 CHEK2O96017 543 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms