RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 PLXNA4Q9HCM2 1894 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TRBV5-4A0A0C4DH59 114 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 WASH3PC4AMC7 463 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 C5orf67F2Z3F1 127 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 STX16-NPEPL1H3BU86 382 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 PSMD12O00232 456 aaPredicted RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TRIM38O00635 465 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 STX16O14662 325 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 RAD51BO15315 384 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TAPBPO15533 448 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 PIP5K1CO60331 668 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ACTL6BO94805 426 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 OR4F21O95013 312 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TSPAN12O95859 305 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 FGF4P08620 206 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 RPSAP08865 295 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 HLA-EP13747 358 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 LBPP18428 481 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 GNAZP19086 355 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 CD9P21926 228 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 DGKAP23743 735 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 NDUFS1P28331 727 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 PRDX3P30048 256 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 HOXA9P31269 272 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 GRK6P43250 576 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 SPINT3P49223 89 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 RGS4P49798 205 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 NUDT2P50583 147 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 GTF2A1P52655 376 aaPredicted RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 PKNOX1P55347 436 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 STX1BP61266 288 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 PSME3P61289 254 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ST8SIA6P61647 398 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 AP2B1P63010 937 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 CREB5Q02930 508 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 SLC34A1Q06495 639 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 SRSF1Q07955 248 aaKnown RBP eCLIP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 STX5Q13190 355 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 NFATC2Q13469 925 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 EFR3AQ14156 821 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 FASTKQ14296 549 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 GRB7Q14451 532 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 SQLEQ14534 574 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 HERC3Q15034 1050 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TGFBIQ15582 683 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 KIF19Q2TAC6 998 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TRMT5Q32P41 509 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 MMEL1Q495T6 779 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ATP13A5Q4VNC0 1218 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 SGO1Q5FBB7 561 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TCEAL5Q5H9L2 206 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 FAM78AQ5JUQ0 283 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TCHHL1Q5QJ38 904 aaPredicted RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 GPRC6AQ5T6X5 926 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 WLSQ5T9L3 541 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TMEM65Q6PI78 240 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 CYHR1Q6ZMK1 362 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 FRA10AC1Q70Z53 315 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 HSD11B1LQ7Z5J1 315 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 PIP4P1Q86T03 277 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 SYVN1Q86TM6 617 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 HPS6Q86YV9 775 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 KIRREL3Q8IZU9 778 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 FBXW8Q8N3Y1 598 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ZBTB2Q8N680 514 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ZNF557Q8N988 423 aaPredicted RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ATG16L2Q8NAA4 619 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 VPS37AQ8NEZ2 397 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 OR2A12Q8NGT7 310 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 SLC2A12Q8TD20 617 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 SLC26A7Q8TE54 656 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TWIST2Q8WVJ9 160 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 AKAP1Q92667 903 aaKnown RBP eCLIP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 KCNJ9Q92806 393 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 VOPP1Q96AW1 172 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ULK4Q96C45 1275 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TUBGCP3Q96CW5 907 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 COQ8BQ96D53 544 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 OTUB2Q96DC9 234 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 DCUN1D1Q96GG9 259 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 PDLIM5Q96HC4 596 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 MAELQ96JY0 434 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ZFYVE19Q96K21 471 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 C5orf34Q96MH7 638 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ACOX2Q99424 681 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 SERPINI1Q99574 410 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 COPS8Q99627 209 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 EGFL8Q99944 293 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 QTRT1Q9BXR0 403 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 MRPL1Q9BYD6 325 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 TUBB1Q9H4B7 451 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ZNF385DQ9H6B1 395 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 NOL11Q9H8H0 719 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 SPATS2LQ9NUQ6 558 aaKnown RBP4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ELOVL2Q9NXB9 296 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ZDHHC7Q9NXF8 308 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 NUDT4Q9NZJ9 180 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 ADA2Q9NZK5 511 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 CCDC167Q9P0B6 97 aa4.1□□□□□ -1.75
TM9SF3-205ENST00000485093 IL36AQ9UHA7 158 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms