RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 MTRF1LQ9UGC7 380 aaKnown RBP16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 BOKQ9UMX3 212 aaPredicted RBP16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 DAPP1Q9UN19 280 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 ABCA4P78363 2273 aa16.63■□□□□ 0.25
CHCHD3-203ENST00000448878 NPEPPSL1A6NEC2 478 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 CDC7O00311 574 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 CYR61O00622 381 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 BANF1O75531 89 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 RFPL3SP0C7P2 107 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 HPDP32754 393 aaPredicted RBP16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 WNT3P56703 355 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 C18orf21Q32NC0 220 aaPredicted RBP16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 SPANXN3Q5MJ09 141 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 CCDC137Q6PK04 289 aaKnown RBP16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 PPIL6Q8IXY8 311 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 FBXW8Q8N3Y1 598 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 TNIP2Q8NFZ5 429 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 OR8K3Q8NH51 312 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 QRFPRQ96P65 431 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 NEUROD4Q9HD90 331 aa16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 TRMT1Q9NXH9 659 aaKnown RBP16.62■□□□□ 0.25
CHCHD3-203ENST00000448878 ZNF469Q96JG9 3925 aaPredicted RBP16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 AKAP6Q13023 2319 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 C15orf38-AP3S2A0A0A6YYH1 394 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 CLGNO14967 610 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 ATE1O95260 518 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 TTC4O95801 387 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 IL2RAP01589 272 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 INHBBP09529 407 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 SERTAD2Q14140 314 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 PIGGQ5H8A4 983 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 TMEM198Q66K66 360 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 SLCO4C1Q6ZQN7 724 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 NAXEQ8NCW5 288 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 FAM13CQ8NE31 585 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 NEIL3Q8TAT5 605 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 LINC01560Q8TB33 94 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 SLC22A8Q8TCC7 542 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 CERS2Q96G23 380 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 SH3GL2Q99962 352 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 EPB41L4BQ9H329 900 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 ZNF395Q9H8N7 513 aaPredicted RBP16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 ZFP64Q9NPA5 681 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 ACANP16112 2415 aa16.61■□□□□ 0.25
CHCHD3-203ENST00000448878 ABCA2Q9BZC7 2435 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 NCF1BA6NI72 391 aaPredicted RBP16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 NCF1CA8MVU1 366 aaPredicted RBP16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 CLEC3AO75596 197 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 ETHE1O95571 254 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 EPXP11678 715 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 COX7A2P14406 83 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 NCF1P14598 390 aaPredicted RBP16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 AGFG1P52594 562 aaKnown RBP16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 TGM3Q08188 693 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 DAZAP2Q15038 168 aaPredicted RBP16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 PPP1R3AQ16821 1122 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 HP1BP3Q5SSJ5 553 aaPredicted RBP16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 TEDDM1Q5T9Z0 273 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 ABHD17CQ6PCB6 329 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 SEM1Q6ZVN7 128 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 MAATS1Q7Z4T9 603 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 KIF18BQ86Y91 864 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 KIAA1191Q96A73 305 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 PDLIM5Q96HC4 596 aaKnown RBP16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 YIPF4Q9BSR8 244 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 ZNF703Q9H7S9 590 aaPredicted RBP16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 FOXD3Q9UJU5 478 aaPredicted RBP16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 SPACA6W5XKT8 324 aa16.6■□□□□ 0.25
CHCHD3-203ENST00000448878 ARHGAP21Q5T5U3 1957 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 GOLGA6L6A8MZA4 724 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 AHRRA9YTQ3 701 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 DYRK3O43781 588 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 TRAPPC6AO75865 159 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 LRATO95237 230 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 GDF1P27539 372 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 GSTM2P28161 218 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 HNMTP50135 292 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 POU4F3Q15319 338 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 PPP1R7Q15435 360 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 MPEG1Q2M385 716 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 CNTN4Q8IWV2 1026 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 OR4N5Q8IXE1 308 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 NKAPQ8N5F7 415 aaKnown RBP16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 TRIM58Q8NG06 486 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 ZNF721Q8TF20 911 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 CFAP36Q96G28 342 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 MS4A14Q96JA4 679 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 DGAT2Q96PD7 388 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 F2RL3Q96RI0 385 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 CTNNAL1Q9UBT7 734 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 CORO1CQ9ULV4 474 aaPredicted RBP16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 OARD1Q9Y530 152 aa16.59■□□□□ 0.25
CHCHD3-203ENST00000448878 KDM4EB2RXH2 506 aaPredicted RBP16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 EEF1E1-BLOC1S5C9J1V9 151 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 EEF1E1O43324 174 aaKnown RBP16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 SH3BGRLO75368 114 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 EPPINO95925 133 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 HOXC12P31275 282 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 MSH2P43246 934 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 NKX6-1P78426 367 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms