RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 H2AFJQ9BTM1 129 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 PITHD1Q9GZP4 211 aaPredicted RBP12.23□□□□□ -0.45
HERC3-203ENST00000407637 FTSJ1Q9UET6 329 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 ZAR1LA6NP61 321 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 TMEM229AB2RXF0 380 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 J3KTA2 159 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 SLC28A1O00337 649 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 PRRG1O14668 218 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 FGF2P09038 288 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 CDKN1CP49918 316 aaPredicted RBP12.23□□□□□ -0.45
HERC3-203ENST00000407637 KIAA1024LP59773 190 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 SLC10A7Q0GE19 358 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 ADAM15Q13444 863 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 DSG2Q14126 1118 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 CRTC2Q53ET0 693 aaPredicted RBP12.23□□□□□ -0.45
HERC3-203ENST00000407637 ARHGAP15Q53QZ3 475 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 ATAT1Q5SQI0 421 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 CCDC36Q8IYA8 594 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 C1orf52Q8N6N3 182 aaKnown RBP12.23□□□□□ -0.45
HERC3-203ENST00000407637 SLC6A18Q96N87 628 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 MED18Q9BUE0 208 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 POMT2Q9UKY4 750 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 SLC9A8Q9Y2E8 581 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 A0A1B0GVI7 797 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 FAM170BA6NMN3 283 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 SELENOFO60613 162 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 NDUFS3O75489 264 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 IGHA2P01877 340 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 TFPIP10646 304 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 LCN1P31025 176 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 HNMTP50135 292 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 TSPAN5P62079 268 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 COX10Q12887 443 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 NTRK2Q16620 822 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
HERC3-203ENST00000407637 FAM182BQ5T319 152 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 ZNF621Q6ZSS3 439 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 RNF180Q86T96 592 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 CARNMT1Q8N4J0 409 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 PROKR2Q8NFJ6 384 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 HSD17B8Q92506 261 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 NELL1Q92832 810 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 SCRN2Q96FV2 425 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 OR2M2Q96R28 347 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 PANX1Q96RD7 426 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 SLC19A3Q9BZV2 496 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 TINAGL1Q9GZM7 467 aaPredicted RBP12.22□□□□□ -0.45
HERC3-203ENST00000407637 ZNF768Q9H5H4 540 aaKnown RBP12.22□□□□□ -0.45
HERC3-203ENST00000407637 NUDT4Q9NZJ9 180 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 CPA4Q9UI42 421 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 TINAGQ9UJW2 476 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 A0A0B4J203 849 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 F8W810 466 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 FPGTO14772 594 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 SIGLEC6O43699 453 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 MPZL2O60487 215 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 GUCA1CO95843 209 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 PEX11BO96011 259 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 CPEP16870 476 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 GDI2P50395 445 aaKnown RBP12.22□□□□□ -0.45
HERC3-203ENST00000407637 IL2P60568 153 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 C3orf38Q5JPI3 329 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 PDSS1Q5T2R2 415 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 FIP1L1Q6UN15 594 aaKnown RBP12.22□□□□□ -0.45
HERC3-203ENST00000407637 OR4D10Q8NGI6 311 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 CD200R1Q8TD46 325 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 DDOQ99489 341 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 GOLGA2P5Q9HBQ8 144 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 CD93Q9NPY3 652 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 TMEM30AQ9NV96 361 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 OSER1Q9NX31 292 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 EXTL2Q9UBQ6 330 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 MLXQ9UH92 298 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 DPP7Q9UHL4 492 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 GPR160Q9UJ42 338 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 SCP2D1Q9UJQ7 156 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 PLCL2Q9UPR0 1127 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 ERVK-19Q9WJR5 959 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 AKT3Q9Y243 479 aa12.22□□□□□ -0.45
HERC3-203ENST00000407637 GABRR3A8MPY1 467 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 FAM227AF5H4B4 570 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 SSNA1O43805 119 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 SSX5O60225 188 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 ULK1O75385 1050 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 KDM4BO94953 1096 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 GDF5P43026 501 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 CAPZA2P47755 286 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 CENPAP49450 140 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 SELENOPP49908 381 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 ZP1P60852 638 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 CAMK1Q14012 370 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 PCBP2Q15366 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
HERC3-203ENST00000407637 ST3GAL2Q16842 350 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 SPIN4Q56A73 249 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 SLC27A1Q6PCB7 646 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 CORO6Q6QEF8 472 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 ALKAL2Q6UX46 152 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 METTL7BQ6UX53 244 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 WASH2PQ6VEQ5 465 aa12.21□□□□□ -0.45
HERC3-203ENST00000407637 KRT74Q7RTS7 529 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms