RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 HIST2H2AA3Q6FI13 130 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 CNKSR3Q6P9H4 555 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 TMC5Q6UXY8 1006 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 KRT73Q86Y46 540 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 TAGAPQ8N103 731 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 MMP21Q8N119 569 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 CELF2-AS1Q8N7Q2 184 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 IL17RCQ8NAC3 791 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 ZNF740Q8NDX6 193 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 GPR32P1Q8NGA4 272 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 KLHL6Q8WZ60 621 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 PPP1R16AQ96I34 528 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 WDFY2Q96P53 400 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 FUZQ9BT04 418 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 BARHL1Q9BZE3 327 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 UCK2Q9BZX2 261 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 ASAH2Q9NR71 780 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 SPATA7Q9P0W8 599 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 IL36AQ9UHA7 158 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 MGAT4BQ9UQ53 548 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 NINQ8N4C6 2090 aa8.29□□□□□ -1.08
CLK1-201ENST00000321356 A8MU76 341 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 PDZK1P1A8MUH7 402 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 PSMD11O00231 422 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 RGS13O14921 159 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SLITRK5O94991 958 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 MFN2O95140 757 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 APOA1P02647 267 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 C8AP07357 584 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ELFN1P0C7U0 828 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SYN1P17600 705 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 DDX5P17844 614 aaKnown RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 ITGB7P26010 798 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ELAVL4P26378 380 aaKnown RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 RPS19P39019 145 aaKnown RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 OPRD1P41143 372 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 CRYBB2P43320 205 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 VASPP50552 380 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 ATN1P54259 1190 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 MEF2AQ02078 507 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 NCF4Q15080 339 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SF3B4Q15427 424 aaKnown RBP eCLIP8.28□□□□□ -1.088e-9■■■■■ 52
CLK1-201ENST00000321356 LRRC26Q2I0M4 334 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 LEXMQ3ZCV2 418 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TCTN3Q6NUS6 607 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 CEACAM20Q6UY09 585 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SPATC1Q76KD6 591 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TMCO2Q7Z6W1 182 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 SLC9B2Q86UD5 537 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 FAM129CQ86XR2 697 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 HORMAD2Q8N7B1 307 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 LMNTD1Q8N9Z9 388 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SLAIN1Q8ND83 568 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ST13P5Q8NFI4 369 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 VN1R2Q8NFZ6 395 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SLC38A5Q8WUX1 472 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ASB15Q8WXK1 588 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 UBE2E3Q969T4 207 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TMCO6Q96DC7 493 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 DTD2Q96FN9 168 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ZNF486Q96H40 463 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 LRIG1Q96JA1 1093 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 COQ10AQ96MF6 247 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SLC6A18Q96N87 628 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 IL4I1Q96RQ9 567 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 KCNS3Q9BQ31 491 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SLX1AQ9BQ83 275 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ASPNQ9BXN1 380 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ZNF717Q9BY31 904 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 NLNQ9BYT8 704 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ZBP1Q9H171 429 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SLAMF7Q9NQ25 335 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 C11orf16Q9NQ32 467 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 MIEF1Q9NQG6 463 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 CCDC177Q9NQR7 707 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 SPHK2Q9NRA0 654 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 C14orf119Q9NWQ9 140 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 NDUFB11Q9NX14 153 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SEC14L4Q9UDX3 406 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ACAD8Q9UKU7 415 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 RBMX2Q9Y388 322 aaKnown RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 V9GYH0 126 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 HYKKA2RU49 373 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TTC36A6NLP5 189 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ZNF670-ZNF695F2Z2N8 137 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 FAAHO00519 579 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 CAPN5O15484 640 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 SPINT1O43278 529 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TPST2O60704 377 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 CSO75390 466 aaKnown RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 UGT2B17O75795 530 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 SEMA3DO95025 777 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 TBX6O95947 436 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 TP53P04637 393 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 HBQ1P09105 142 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 DDCP20711 480 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 XPAP23025 273 aaPredicted RBP8.28□□□□□ -1.08
CLK1-201ENST00000321356 POU1F1P28069 291 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 ACADLP28330 430 aa8.28□□□□□ -1.08
CLK1-201ENST00000321356 NR4A2P43354 598 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms