RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 VSTM2BA6NLU5 285 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 CLDN4O14493 209 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 PRKRAO75569 313 aaKnown RBP14.1□□□□□ -0.15
NUP54-213ENST00000513352 AIFM1O95831 613 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 IL3P08700 152 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 LBPP18428 481 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 EIF2S3P41091 472 aaKnown RBP14.1□□□□□ -0.15
NUP54-213ENST00000513352 EMP2P54851 167 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 AQP5P55064 265 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 TAS2R50P59544 299 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 ZNF763Q0D2J5 394 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 SLC13A2Q13183 592 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 MAD2L1Q13257 205 aaPredicted RBP14.1□□□□□ -0.15
NUP54-213ENST00000513352 TUBB8Q3ZCM7 444 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 SLC9B1Q4ZJI4 515 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 RFTN2Q52LD8 501 aaPredicted RBP14.1□□□□□ -0.15
NUP54-213ENST00000513352 C6orf136Q5SQH8 315 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 MRM1Q6IN84 353 aaKnown RBP14.1□□□□□ -0.15
NUP54-213ENST00000513352 MAVSQ7Z434 540 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 CLNKQ7Z7G1 428 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 LAPTM4BQ86VI4 370 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 TMEM151BQ8IW70 566 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 LRRC34Q8IZ02 419 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 OR2Y1Q8NGV0 311 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 CLHC1Q8NHS4 586 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 C16orf78Q8WTQ4 265 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 STARD8Q92502 1023 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 METTL2AQ96IZ6 378 aaKnown RBP14.1□□□□□ -0.15
NUP54-213ENST00000513352 SPSB2Q99619 263 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 FAIM2Q9BWQ8 316 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 TRIM55Q9BYV6 548 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 TGIF2Q9GZN2 237 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 VN1R1Q9GZP7 353 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 PRTFDC1Q9NRG1 225 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 KCMF1Q9P0J7 381 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 DCTN4Q9UJW0 460 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 EIF3LQ9Y262 564 aaKnown RBP14.1□□□□□ -0.15
NUP54-213ENST00000513352 DLGAP4Q9Y2H0 992 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 TMED5Q9Y3A6 229 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 ASB4Q9Y574 426 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 IGF2RP11717 2491 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 CROCCQ5TZA2 2017 aa14.1□□□□□ -0.15
NUP54-213ENST00000513352 FRYQ5TBA9 3013 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 A0A1W2PR48 441 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 OR2W5A6NFC9 320 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 GLOD5A6NK44 160 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 IDSB3KWA1 339 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 NPIPB8E9PQR5 432 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 TERTO14746 1132 aaKnown RBP14.09□□□□□ -0.15
NUP54-213ENST00000513352 PRMT3O60678 531 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 CREG1O75629 220 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 KLF7O75840 302 aaPredicted RBP14.09□□□□□ -0.15
NUP54-213ENST00000513352 PRKAR1AP10644 381 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 HNRNPFP52597 415 aaKnown RBP14.09□□□□□ -0.15
NUP54-213ENST00000513352 TRA2BP62995 288 aaKnown RBP14.09□□□□□ -0.15
NUP54-213ENST00000513352 NDUFAF5Q5TEU4 345 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 IL23RQ5VWK5 629 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 GALNT18Q6P9A2 607 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 PROSER1Q86XN7 944 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 MMP21Q8N119 569 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 TMEM132CQ8N3T6 1108 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 LIX1Q8N485 282 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 TMEM52Q8NDY8 209 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 RFWD2Q8NHY2 731 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 METTL21AQ8WXB1 218 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 CHMP6Q96FZ7 201 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 PTCHD1Q96NR3 888 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 TSSK3Q96PN8 268 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 FAM107BQ9H098 131 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 RPF2Q9H7B2 306 aaKnown RBP14.09□□□□□ -0.15
NUP54-213ENST00000513352 LANCL2Q9NS86 450 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 NOP53Q9NZM5 478 aaKnown RBP14.09□□□□□ -0.15
NUP54-213ENST00000513352 G3BP2Q9UN86 482 aaKnown RBP14.09□□□□□ -0.15
NUP54-213ENST00000513352 PCDHGA6Q9Y5G7 932 aa14.09□□□□□ -0.15
NUP54-213ENST00000513352 A0A0G2JND7 137 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 MYOCOSA0A1B0GUC4 107 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 CDC14CA4D256 554 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 CYR61O00622 381 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 PROM1O43490 865 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 AKAP10O43572 662 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 TGDSO95455 350 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 CAPNS1P04632 268 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 UMODP07911 640 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 BCKDHAP12694 445 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 SDC1P18827 310 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 MAOAP21397 527 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 IDH3AP50213 366 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 ERVK-8P63133 956 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 BTG2P78543 158 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 ID2Q02363 134 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 C2orf80Q0P641 193 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 IL10RAQ13651 578 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 KIAA0040Q15053 153 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 EPGNQ6UW88 154 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 RAB43Q86YS6 212 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 ZNF595Q8IYB9 648 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 ZSCAN1Q8NBB4 408 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 GFM2Q969S9 779 aaKnown RBP14.08□□□□□ -0.16
NUP54-213ENST00000513352 TM4SF18Q96CE8 201 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 SLC45A3Q96JT2 553 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms