RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 ACPTQ9BZG2 426 aa12.76□□□□□ -0.37
FDPS-219ENST00000495308 ZNF700Q9H0M5 742 aa12.76□□□□□ -0.37
FDPS-219ENST00000495308 DDX31Q9H8H2 851 aaKnown RBP12.76□□□□□ -0.37
FDPS-219ENST00000495308 ATP13A2Q9NQ11 1180 aa12.76□□□□□ -0.37
FDPS-219ENST00000495308 PRDM9Q9NQV7 894 aa12.76□□□□□ -0.37
FDPS-219ENST00000495308 ZNF71Q9NQZ8 489 aaPredicted RBP12.76□□□□□ -0.37
FDPS-219ENST00000495308 PRTFDC1Q9NRG1 225 aa12.76□□□□□ -0.37
FDPS-219ENST00000495308 VPS29Q9UBQ0 182 aa12.76□□□□□ -0.37
FDPS-219ENST00000495308 C19orf25Q9UFG5 118 aaPredicted RBP12.76□□□□□ -0.37
FDPS-219ENST00000495308 MRPS33Q9Y291 106 aaKnown RBP12.76□□□□□ -0.37
FDPS-219ENST00000495308 TP53TG5Q9Y2B4 290 aa12.76□□□□□ -0.37
FDPS-219ENST00000495308 IGKV3D-11A0A0A0MRZ8 115 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 A0A1W2PQ72 361 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 TCRBV16S1A1N1A0A5B0 115 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 ARHGAP10A1A4S6 786 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 A8MUA0 341 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 TMEM233B4DJY2 109 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 PCDH17O14917 1159 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 AZIN1O14977 448 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 CEACAM4O75871 244 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 PDGFAP04085 211 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 FAM58BPP0C7Q3 252 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 HSD3B1P14060 373 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 HSD3B2P26439 372 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 TPP2P29144 1249 aaPredicted RBP12.75□□□□□ -0.37
FDPS-219ENST00000495308 PPP2R1BP30154 601 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 ARRB2P32121 409 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 OR4D2P58180 307 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 GALNT1Q10472 559 aaPredicted RBP12.75□□□□□ -0.37
FDPS-219ENST00000495308 TBL3Q12788 808 aaKnown RBP12.75□□□□□ -0.37
FDPS-219ENST00000495308 SLC13A2Q13183 592 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 RCN2Q14257 317 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 SFT2D3Q587I9 215 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 ARL13AQ5H913 290 aaPredicted RBP12.75□□□□□ -0.37
FDPS-219ENST00000495308 C18orf63Q68DL7 685 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 HDXQ7Z353 690 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 COMMD6Q7Z4G1 85 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 GPR180Q86V85 440 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 SCUBE1Q8IWY4 988 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 ZNF595Q8IYB9 648 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 C1orf52Q8N6N3 182 aaKnown RBP12.75□□□□□ -0.37
FDPS-219ENST00000495308 AGR3Q8TD06 166 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 MGARPQ8TDB4 240 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 SREK1Q8WXA9 508 aaKnown RBP12.75□□□□□ -0.37
FDPS-219ENST00000495308 THOC3Q96J01 351 aaKnown RBP12.75□□□□□ -0.37
FDPS-219ENST00000495308 PAIP2Q9BPZ3 127 aaKnown RBP12.75□□□□□ -0.37
FDPS-219ENST00000495308 TRMOQ9BU70 441 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 RIC8BQ9NVN3 520 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 LYARQ9NX58 379 aaKnown RBP12.75□□□□□ -0.37
FDPS-219ENST00000495308 GPR83Q9NYM4 423 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 PHF11Q9UIL8 331 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 TUBD1Q9UJT1 453 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 ATG4BQ9Y4P1 393 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 MMACHCQ9Y4U1 282 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 ASB4Q9Y574 426 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 PTGDR2Q9Y5Y4 395 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 SPACA6W5XKT8 324 aa12.75□□□□□ -0.37
FDPS-219ENST00000495308 CROCCQ5TZA2 2017 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 TMEM120BA0PK00 339 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 H3BQF6 201 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 LDB3O75112 727 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 PRR35P0CG20 571 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 DHRS4L1P0CG22 281 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 UROSP10746 265 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 HSD17B7P56937 341 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 TNFRSF17Q02223 184 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 ID2Q02363 134 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 BTKQ06187 659 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 ACTN3Q08043 901 aaPredicted RBP12.74□□□□□ -0.37
FDPS-219ENST00000495308 CHI3L2Q15782 390 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 LACTB2Q53H82 288 aaPredicted RBP12.74□□□□□ -0.37
FDPS-219ENST00000495308 AGBL2Q5U5Z8 902 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 MRM1Q6IN84 353 aaKnown RBP12.74□□□□□ -0.37
FDPS-219ENST00000495308 PAPD4Q6PIY7 484 aaKnown RBP12.74□□□□□ -0.37
FDPS-219ENST00000495308 PAGE2Q7Z2X7 111 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 KBTBD2Q8IY47 623 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 GBP7Q8N8V2 638 aaPredicted RBP12.74□□□□□ -0.37
FDPS-219ENST00000495308 LSM14AQ8ND56 463 aaKnown RBP12.74□□□□□ -0.37
FDPS-219ENST00000495308 OR6Y1Q8NGX8 325 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 PPP1R14CQ8TAE6 165 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 UCN3Q969E3 161 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 TUBB6Q9BUF5 446 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 SLC25A18Q9H1K4 315 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 NMRK1Q9NWW6 199 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 TEX10Q9NXF1 929 aaPredicted RBP12.74□□□□□ -0.37
FDPS-219ENST00000495308 AHSPQ9NZD4 102 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 CLDN16Q9Y5I7 305 aa12.74□□□□□ -0.37
FDPS-219ENST00000495308 A0A1W2PR48 441 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 GLOD5A6NK44 160 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 WASHC1A8K0Z3 465 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 CLDN4O14493 209 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 BIRC5O15392 142 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 PROM1O43490 865 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 LYPLA1O75608 230 aaPredicted RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 AIFM1O95831 613 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 NR2F6P10588 404 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 ITGAMP11215 1152 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 BGNP21810 368 aa12.73□□□□□ -0.37
FDPS-219ENST00000495308 BUD31P41223 144 aaPredicted RBP12.73□□□□□ -0.37
FDPS-219ENST00000495308 PGDP52209 483 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms