RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 KCTD11Q693B1 232 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 MED27Q6P2C8 311 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 PNCKQ6P2M8 343 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 MAMDC4Q6UXC1 1216 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 RNF180Q86T96 592 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 NOXA1Q86UR1 476 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 LRRTM3Q86VH5 581 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 LSMEM2Q8N112 164 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 LILRA2Q8N149 483 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 VWA5B2Q8N398 1253 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 FAM46DQ8NEK8 389 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SMARCD2Q92925 531 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 LGALS12Q96DT0 336 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SGTBQ96EQ0 304 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SLC35G5Q96KT7 338 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 C11orf84Q9BUA3 381 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 CACNG6Q9BXT2 260 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SMOC2Q9H3U7 446 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 THG1LQ9NWX6 298 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 CLCA3PQ9Y6N3 262 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 LRRC37AA6NMS7 1700 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 MCM3APO60318 1980 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ZNF705GA8MUZ8 300 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 PDYNP01213 254 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 RAB4AP20338 218 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 TACR2P21452 398 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 DNAJB1P25685 340 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 GGT5P36269 586 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 GJA5P36382 358 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 LEPRP48357 1165 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 MTPNP58546 118 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 GABARAPL2P60520 117 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 HNRNPA0Q13151 305 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 RAB39AQ14964 217 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 UNC50Q53HI1 259 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ALG1LQ6GMV1 187 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ELP2Q6IA86 826 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 DOK6Q6PKX4 331 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SLC22A25Q6T423 547 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ALKAL1Q6UXT8 129 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ZNF574Q6ZN55 896 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 LINC01465Q8N7H1 131 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 OR7G1Q8NGA0 311 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 CXorf40AQ8TE69 158 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 CNOT9Q92600 299 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 NT5C3BQ969T7 300 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 TMIGD2Q96BF3 282 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SLC41A3Q96GZ6 507 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 CGREF1Q99674 301 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 GAL3ST1Q99999 423 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SULT4A1Q9BR01 284 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SOX17Q9H6I2 414 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 TMEM100Q9NV29 134 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 FKBPLQ9UIM3 349 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 PCDHGA7Q9Y5G6 932 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ZNFX1Q9P2E3 1918 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 NEDD8-MDP1E9PL57 170 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 PPP6CO00743 305 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 INPPL1O15357 1258 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 DUSP11O75319 330 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ZNF821O75541 412 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 S1PR4O95977 384 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 CDK1P06493 297 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 OR8U9P0C7N5 309 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 RPS24P62847 133 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ERVK-25P63136 954 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 CD47Q08722 323 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 NTRK2Q16620 822 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 UPP1Q16831 310 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 NDUFAF5Q5TEU4 345 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SPRYD7Q5W111 196 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 GDF6Q6KF10 455 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SKA3Q8IX90 412 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 C12orf45Q8N5I9 185 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 JAGN1Q8N5M9 183 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SIDT2Q8NBJ9 832 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SLC22A8Q8TCC7 542 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 RPL10LQ96L21 214 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 IL4I1Q96RQ9 567 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SLC5A7Q9GZV3 580 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ABCG8Q9H221 673 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 OR51E2Q9H255 320 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 FLRT1Q9NZU1 646 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 CNOT11Q9UKZ1 510 aaKnown RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 RAI2Q9Y5P3 530 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 CROCCQ5TZA2 2017 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 LCHNA4D1U4 455 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 C1QTNF3-AMACRE9PGA6 284 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 E2F3O00716 465 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SHOXO15266 292 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ECI2O75521 394 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ARHGEF15O94989 841 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 OAZ2O95190 189 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ASGR1P07306 291 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 HOXD8P13378 290 aaPredicted RBP5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ARSFP54793 590 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 UFM1P61960 85 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 SH3BP2P78314 561 aa5.88□□□□□ -1.47
HNRNPU-208ENST00000475997 ABHD18Q0P651 414 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 325.5 ms