RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 CDK16Q00536 496 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 SLC13A2Q13183 592 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 PAQR3Q6TCH7 311 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 CLNKQ7Z7G1 428 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 FAM47BQ8NA70 645 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 TRPV3Q8NET8 790 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 NEIL3Q8TAT5 605 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 ZNF669Q96BR6 464 aaPredicted RBP15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 LRRC46Q96FV0 321 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 CSF3RQ99062 836 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 NDNQ99608 321 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 TSGA10Q9BZW7 698 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 JKAMPQ9P055 326 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 TRMT6Q9UJA5 497 aaKnown RBP15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 NINQ8N4C6 2090 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 DOCK7Q96N67 2140 aa15.83■□□□□ 0.12
UBE2D4-209ENST00000454428 URADA6NGE7 173 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 CLDN4O14493 209 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 P04436 131 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 HNRNPH1P31943 449 aaKnown RBP15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 ANP32AP39687 249 aaKnown RBP15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 RAB38P57729 211 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 CCZ1BP86790 482 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 CCZ1P86791 482 aaPredicted RBP15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 SORDQ00796 357 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 THOC5Q13769 683 aaKnown RBP15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 BMPR2Q13873 1038 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 CSHL1Q14406 222 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 CCNG2Q16589 344 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 ZNF791Q3KP31 576 aaPredicted RBP15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 BBS9Q3SYG4 887 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 SEL1L2Q5TEA6 688 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 ANKRD22Q5VYY1 191 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 LRRC8EQ6NSJ5 796 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 DRICH1Q6PGQ1 229 aaPredicted RBP15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 LYPD8Q6UX82 237 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 C4orf22Q6V702 233 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 MAATS1Q7Z4T9 603 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 AGGF1Q8N302 714 aaeCLIP15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 LRRC25Q8N386 305 aaPredicted RBP15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 TMEM132CQ8N3T6 1108 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 TBC1D19Q8N5T2 526 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 MORN4Q8NDC4 146 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 WDR83Q9BRX9 315 aaKnown RBP15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 ACKR4Q9NPB9 350 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 FBXO5Q9UKT4 447 aa15.82■□□□□ 0.12
UBE2D4-209ENST00000454428 CYR61O00622 381 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 NRDCO43847 1150 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 GOSR1O95249 250 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 TBX6O95947 436 aaPredicted RBP15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 MAGEA6P43360 314 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 AGFG1P52594 562 aaKnown RBP15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 TERF1P54274 439 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 CDKN2DP55273 166 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 ARMC3Q5W041 872 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 CASC4Q6P4E1 433 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 OPN5Q6U736 354 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 ZNF595Q8IYB9 648 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 RNF214Q8ND24 703 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 SIMC1Q8NDZ2 872 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 OR8K3Q8NH51 312 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 FBXL8Q96CD0 374 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 LINGO1Q96FE5 620 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 Q96MF0 132 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 QRFPRQ96P65 431 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 NPLQ9BXD5 320 aaPredicted RBP15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 OR8D2Q9GZM6 311 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 EPB41L4BQ9H329 900 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 PELI2Q9HAT8 420 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 ZFP64Q9NPA5 681 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 ARL15Q9NXU5 204 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 VTI1BQ9UEU0 232 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 CLCA3PQ9Y6N3 262 aa15.81■□□□□ 0.12
UBE2D4-209ENST00000454428 AHRRA9YTQ3 701 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 SMAD7O15105 426 aaKnown RBP15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 IPO7O95373 1038 aaKnown RBP15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 GABRB3P28472 473 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 KCNJ1P48048 391 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 TRPC1P48995 793 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 RGS4P49798 205 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 PGGT1BP53609 377 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 CRYZQ08257 329 aaKnown RBP15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 RBBP5Q15291 538 aaKnown RBP15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 PIGGQ5H8A4 983 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 RBM20Q5T481 1227 aaKnown RBP15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 PRAMEF20Q5VT98 475 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 NXPE4Q6UWF7 544 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 TMPRSS11BQ86T26 416 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 KIF18BQ86Y91 864 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 LACC1Q8IV20 430 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 PALM2Q8IXS6 379 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 LRRC75A-AS1Q8N1F1 130 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 MYO1HQ8N1T3 1032 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 SLC2A12Q8TD20 617 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 PAQR8Q8TEZ7 354 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 ZNF592Q92610 1267 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 GAL3ST3Q96A11 431 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 MS4A6EQ96DS6 147 aa15.8■□□□□ 0.12
UBE2D4-209ENST00000454428 YIPF4Q9BSR8 244 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms