RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 LY6KQ17RY6 165 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 C9orf57Q5W0N0 161 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 RGL4Q8IZJ4 473 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 NKAPQ8N5F7 415 aaKnown RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 BMPERQ8N8U9 685 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 OR4C15Q8NGM1 316 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 DNAJB8Q8NHS0 232 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 SENP5Q96HI0 755 aaPredicted RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 PKMYT1Q99640 499 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 SARGQ9BW04 601 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 ZNF214Q9UL59 606 aaPredicted RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 MGAT4BQ9UQ53 548 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 COMMD10Q9Y6G5 202 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 LOC285556D6RIA3 1793 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 MCM3APO60318 1980 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 SUV39H1O43463 412 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 OTCP00480 354 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 EPOP01588 193 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 OPN1SWP03999 348 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 NUDT7P0C024 238 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 ATXN1LP0C7T5 689 aaKnown RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 OGNP20774 298 aaKnown RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 BTCP35070 178 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 FEN1P39748 380 aaKnown RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 RPS7P62081 194 aaKnown RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 RPS14P62263 151 aaKnown RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 ABRQ12979 859 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 GPR33Q49SQ1 333 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 BCDIN3DQ7Z5W3 292 aaKnown RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 LAS2Q8IYD9 372 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 LRRC52Q8N7C0 313 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 NANOGP1Q8N7R0 232 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 REPS2Q8NFH8 660 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 COQ8AQ8NI60 647 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 C1GALT1C1Q96EU7 318 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 PGAP3Q96FM1 320 aaPredicted RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 FAM193BQ96PV7 902 aaPredicted RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 SLC38A2Q96QD8 506 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 ZNF436Q9C0F3 470 aaPredicted RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 SLC25A19Q9HC21 320 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 SARS2Q9NP81 518 aaKnown RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 GINS2Q9Y248 185 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 SPIN1Q9Y657 262 aaPredicted RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 NINQ8N4C6 2090 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 RLFQ13129 1914 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 ZSWIM8A7E2V4 1837 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 G3V3Q6 166 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 GPR171O14626 319 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 PDCD5O14737 125 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 CASKO14936 926 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 ADAMDEC1O15204 470 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 SH3BP5O60239 455 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 DPM1O60762 260 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 VTNP04004 478 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 NMBP08949 121 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 ODC1P11926 461 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 RECQLP46063 649 aaPredicted RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 OR1E2P47887 323 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 ACLYP53396 1101 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 C1DQ13901 141 aaKnown RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 PTPRNQ16849 979 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 MPEG1Q2M385 716 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 FBXO47Q5MNV8 452 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 NLRC3Q7RTR2 1065 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 PAQR7Q86WK9 346 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 BEST4Q8NFU0 473 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 OR2T35Q8NGX2 323 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 KCTD13Q8WZ19 329 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 SFXN2Q96NB2 322 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 ERMAPQ96PL5 475 aaPredicted RBP12.24□□□□□ -0.45
HERC3-203ENST00000407637 GPR63Q9BZJ6 419 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 ABCG5Q9H222 651 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 MPP6Q9NZW5 540 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 PFDN2Q9UHV9 154 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 HCN2Q9UL51 889 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 RNF215Q9Y6U7 377 aa12.24□□□□□ -0.45
HERC3-203ENST00000407637 MEIKINA0A087WXM9 373 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 TEX13CA0A0J9YWL9 993 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
HERC3-203ENST00000407637 NDUFS6O75380 124 aaKnown RBP12.23□□□□□ -0.45
HERC3-203ENST00000407637 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 BPIP17213 487 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 TACR1P25103 407 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 TRIM23P36406 574 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 HSPA7P48741 367 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 CLDN8P56748 225 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 ZXDBP98169 803 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 ACVR1Q04771 509 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 OPCMLQ14982 345 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 TMEM132BQ14DG7 1078 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 METAP1DQ6UB28 335 aaPredicted RBP12.23□□□□□ -0.45
HERC3-203ENST00000407637 C3P1Q6ZMU1 363 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 MAMSTRQ6ZN01 415 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 USP30Q70CQ3 517 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 WDR53Q7Z5U6 358 aaPredicted RBP12.23□□□□□ -0.45
HERC3-203ENST00000407637 CDH26Q8IXH8 852 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 BVESQ8NE79 360 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 MAL2Q969L2 176 aa12.23□□□□□ -0.45
HERC3-203ENST00000407637 INTS12Q96CB8 462 aaKnown RBP12.23□□□□□ -0.45
HERC3-203ENST00000407637 ATF6BQ99941 703 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms