RNA–Protein interactions for RNA: ENST00000357880.7

LINC01554-201, Transcript of long intergenic non-protein coding RNA 1554, humanhuman

TSL 1 (best)

Gene LINC01554, Length 804 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554-201ENST00000357880 TTC19Q6DKK2 380 aaPredicted RBP16.43■□□□□ 0.22
LINC01554-201ENST00000357880 TUBA3EQ6PEY2 450 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 CLEC18BQ6UXF7 455 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 MILR1Q7Z6M3 343 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 RPS19BP1Q86WX3 136 aaKnown RBP16.43■□□□□ 0.22
LINC01554-201ENST00000357880 CLEC18CQ8NCF0 446 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 APCDD1LQ8NCL9 501 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 B3GNT7Q8NFL0 401 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 OR4F6Q8NGB9 312 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 SUN3Q8TAQ9 357 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 ZNF483Q8TF39 744 aaPredicted RBP16.43■□□□□ 0.22
LINC01554-201ENST00000357880 ALOXE3Q9BYJ1 711 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 ABI3Q9P2A4 366 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 SPACA6W5XKT8 324 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 COL12A1Q99715 3063 aa16.43■□□□□ 0.22
LINC01554-201ENST00000357880 SMIM23A6NLE4 172 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 GABRR3A8MPY1 467 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 FOXE1O00358 373 aaPredicted RBP16.42■□□□□ 0.22
LINC01554-201ENST00000357880 DLX3O60479 287 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 PRAMEF2O60811 474 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 EEDO75530 441 aaKnown RBP16.42■□□□□ 0.22
LINC01554-201ENST00000357880 TAC1P20366 129 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 STX4Q12846 297 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 SGO1Q5FBB7 561 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 FAM219BQ5XKK7 198 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 FAM180AQ6UWF9 173 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 FAM26EQ8N5C1 309 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 PRR7Q8TB68 274 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 ACMSDQ8TDX5 336 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 THAP3Q8WTV1 239 aaPredicted RBP16.42■□□□□ 0.22
LINC01554-201ENST00000357880 FAR1Q8WVX9 515 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 SIGLEC12Q96PQ1 595 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 TAAR6Q96RI8 345 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 UTP23Q9BRU9 249 aaKnown RBP16.42■□□□□ 0.22
LINC01554-201ENST00000357880 ZNF717Q9BY31 904 aaPredicted RBP16.42■□□□□ 0.22
LINC01554-201ENST00000357880 DEFB126Q9BYW3 111 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 ADAP2Q9NPF8 381 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 ASH1LQ9NR48 2969 aaKnown RBP16.42■□□□□ 0.22
LINC01554-201ENST00000357880 ESPL1Q14674 2120 aa16.42■□□□□ 0.22
LINC01554-201ENST00000357880 TRBV11-1A0A0K0K1C0 115 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 ANKUB1A6NFN9 424 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 TPP2P29144 1249 aaPredicted RBP16.41■□□□□ 0.22
LINC01554-201ENST00000357880 BSGP35613 385 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 HNRNPH2P55795 449 aaKnown RBP16.41■□□□□ 0.22
LINC01554-201ENST00000357880 HERVK_113P63132 956 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 OC90Q02509 493 aaPredicted RBP16.41■□□□□ 0.22
LINC01554-201ENST00000357880 SRSF11Q05519 484 aaKnown RBP16.41■□□□□ 0.22
LINC01554-201ENST00000357880 CUL3Q13618 768 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 TERF2Q15554 542 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 ZNF766Q5HY98 468 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 ZNF468Q5VIY5 522 aaPredicted RBP16.41■□□□□ 0.22
LINC01554-201ENST00000357880 FRG2Q64ET8 278 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 C18orf63Q68DL7 685 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 SPINK14Q6IE38 97 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 LETMD1Q6P1Q0 360 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 GPR180Q86V85 440 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 LCA5Q86VQ0 697 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 OR4N5Q8IXE1 308 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 ZCCHC7Q8N3Z6 543 aaKnown RBP16.41■□□□□ 0.22
LINC01554-201ENST00000357880 TRPC4APQ8TEL6 797 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 NCLNQ969V3 563 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 ANKRD9Q96BM1 317 aaPredicted RBP16.41■□□□□ 0.22
LINC01554-201ENST00000357880 FRG2BQ96QU4 278 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 C1QTNF3Q9BXJ4 246 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 ERVK-6Q9BXR3 956 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 FARSBQ9NSD9 589 aaKnown RBP16.41■□□□□ 0.22
LINC01554-201ENST00000357880 PSD3Q9NYI0 1048 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 VTI1BQ9UEU0 232 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 ZNF223Q9UK11 482 aaPredicted RBP16.41■□□□□ 0.22
LINC01554-201ENST00000357880 ATG4BQ9Y4P1 393 aa16.41■□□□□ 0.22
LINC01554-201ENST00000357880 TMPRSS11DO60235 418 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 PRKRAO75569 313 aaKnown RBP16.4■□□□□ 0.22
LINC01554-201ENST00000357880 SUPT7LO94864 414 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 OTCP00480 354 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 GBAP04062 536 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 GSTA1P08263 222 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 ATP5F1P24539 256 aaPredicted RBP16.4■□□□□ 0.22
LINC01554-201ENST00000357880 HSD17B3P37058 310 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 CLCN2P51788 898 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 GPR143P51810 404 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 MLF1P58340 268 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 VSNL1P62760 191 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 CLCQ05315 142 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 IFT88Q13099 833 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 OR1C1Q15619 314 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 ELAVL1Q15717 326 aaKnown RBP16.4■□□□□ 0.22
LINC01554-201ENST00000357880 GGTA1PQ4G0N0 100 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 UNC50Q53HI1 259 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 ZNF678Q5SXM1 525 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 FHL5Q5TD97 284 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 LGI4Q8N135 537 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 TMEM132CQ8N3T6 1108 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 BCORP1Q8N888 145 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 MDS2Q8NDY4 140 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 EPS8L3Q8TE67 593 aaKnown RBP16.4■□□□□ 0.22
LINC01554-201ENST00000357880 PTPMT1Q8WUK0 201 aaPredicted RBP16.4■□□□□ 0.22
LINC01554-201ENST00000357880 SREK1Q8WXA9 508 aaKnown RBP16.4■□□□□ 0.22
LINC01554-201ENST00000357880 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.4■□□□□ 0.223e-10■■■■■ 88.3
LINC01554-201ENST00000357880 TMEM237Q96Q45 408 aa16.4■□□□□ 0.22
LINC01554-201ENST00000357880 SERPINI1Q99574 410 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms