RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 FIGNL2A6NMB9 653 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 BCKDKO14874 412 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 CDH1P12830 882 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 ALOX12P18054 663 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 CLCN2P51788 898 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 HYAL2Q12891 473 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 NAE1Q13564 534 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 PAMR1Q6UXH9 720 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 ANKMY2Q8IV38 441 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 SPATA4Q8NEY3 305 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 OR2M7Q8NG81 312 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 GOT1L1Q8NHS2 421 aaPredicted RBP16.1■□□□□ 0.17
RETREG3-210ENST00000590541 CREB3L4Q8TEY5 395 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 VPS39Q96JC1 886 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 C18orf12Q96KH6 178 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 MDFIQ99750 246 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 WDR83Q9BRX9 315 aaKnown RBP16.1■□□□□ 0.17
RETREG3-210ENST00000590541 TTTY12Q9BZ98 90 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 ARL15Q9NXU5 204 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 FBXW2Q9UKT8 454 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 EDARQ9UNE0 448 aa16.1■□□□□ 0.17
RETREG3-210ENST00000590541 A0A0G2JMM0 328 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 A0A1W2PPB8 328 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 A0A1W2PRS3 328 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 A6NNC1 897 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 KIR3DP1A8MWS1 328 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 NDUFS4O43181 175 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 IGHG3P01860 377 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 CASQ1P31415 396 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 ETF1P62495 437 aaKnown RBP16.09■□□□□ 0.17
RETREG3-210ENST00000590541 PLGLB1Q02325 96 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 PHKG1Q16816 387 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 SLC25A35Q3KQZ1 300 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 TMEM198Q66K66 360 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 CYS1Q717R9 158 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 TAOK1Q7L7X3 1001 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 ZC3HC1Q86WB0 502 aaKnown RBP16.09■□□□□ 0.17
RETREG3-210ENST00000590541 PRIMA1Q86XR5 153 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 ZBED8Q8IZ13 594 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 TBC1D19Q8N5T2 526 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 B3GNT7Q8NFL0 401 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 PYROXD1Q8WU10 500 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 CDKL2Q92772 493 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 FBXL8Q96CD0 374 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 ARSGQ96EG1 525 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 SARGQ9BW04 601 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 PHACTR1Q9C0D0 580 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 ATG10Q9H0Y0 220 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 POPDC3Q9HBV1 291 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 PRDM9Q9NQV7 894 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 SNX24Q9Y343 169 aa16.09■□□□□ 0.17
RETREG3-210ENST00000590541 A0A1B0GVC2 190 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 ACOT7O00154 380 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 PRKNO60260 465 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-210ENST00000590541 GLSO94925 669 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-210ENST00000590541 ATE1O95260 518 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 ZNF888P0CJ79 500 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-210ENST00000590541 NPPBP16860 134 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 ZNF37AP17032 561 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-210ENST00000590541 SSR4P51571 173 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 GPR143P51810 404 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 CAV1Q03135 178 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 PWP1Q13610 501 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 DEFB113Q30KQ7 82 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 MBOAT1Q6ZNC8 495 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 C16orf47Q6ZP98 133 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-210ENST00000590541 RGS9BPQ6ZS82 235 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 WDR53Q7Z5U6 358 aaPredicted RBP16.08■□□□□ 0.16
RETREG3-210ENST00000590541 STRA8Q7Z7C7 330 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 ABHD11Q8NFV4 315 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 OR56A3Q8NH54 315 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 RHOJQ9H4E5 214 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 DMRT3Q9NQL9 472 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 ERVK-11Q9UQG0 969 aa16.08■□□□□ 0.16
RETREG3-210ENST00000590541 UTP11Q9Y3A2 253 aaKnown RBP16.08■□□□□ 0.16
RETREG3-210ENST00000590541 NSD1Q96L73 2696 aaPredicted RBP16.07■□□□□ 0.16
RETREG3-210ENST00000590541 A8MVJ9 347 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 MYO1DO94832 1006 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 RAF1P04049 648 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 GSTA2P09210 222 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 INHBBP09529 407 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 HOXC12P31275 282 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 CCR8P51685 355 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 SKP1P63208 163 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 CDKL1Q00532 357 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 XKR6Q5GH73 641 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 NIPAL1Q6NVV3 410 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 TRILQ7L0X0 811 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 SLC22A16Q86VW1 577 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 OR4K1Q8NGD4 311 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 ALKBH8Q96BT7 664 aaKnown RBP16.07■□□□□ 0.16
RETREG3-210ENST00000590541 RAB17Q9H0T7 212 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 LIN28AQ9H9Z2 209 aaKnown RBP16.07■□□□□ 0.16
RETREG3-210ENST00000590541 HPF1Q9NWY4 346 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 SLC17A6Q9P2U8 582 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 CBLCQ9ULV8 474 aa16.07■□□□□ 0.16
RETREG3-210ENST00000590541 PPIEQ9UNP9 301 aaKnown RBP16.07■□□□□ 0.16
RETREG3-210ENST00000590541 YARS2Q9Y2Z4 477 aaKnown RBP16.07■□□□□ 0.16
RETREG3-210ENST00000590541 FN1P02751 2386 aaKnown RBP16.06■□□□□ 0.16
RETREG3-210ENST00000590541 FAM95CA0A1B0GW59 222 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms